Gene : AT4G13760 A. thaliana TAIR10
Defline:  (1 of 16) 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase Genomic Order:  1217
Name:  ? AT4G13760 Secondary Identifier:  ? PAC:19645509
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-1081 Arabidopsis thaliana pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G13760 0.5kb upstream 0.5kb upstream 2091 true Chr4: 7987558-7989648 Arabidopsis thaliana
AT4G13760 0.5kb upstream 0.5kb upstream 500 false Chr4: 7987558-7988057 Arabidopsis thaliana
AT4G13760 0.5kb downstream 0.5kb downstream 2091 true Chr4: 7988058-7990148 Arabidopsis thaliana
AT4G13760 0.5kb downstream 0.5kb downstream 500 false Chr4: 7989649-7990148 Arabidopsis thaliana
AT4G13760 1.0kb upstream 1.0kb upstream 2591 true Chr4: 7987058-7989648 Arabidopsis thaliana
AT4G13760 1.0kb upstream 1.0kb upstream 1000 false Chr4: 7987058-7988057 Arabidopsis thaliana
AT4G13760 1.0kb downstream 1.0kb downstream 2591 true Chr4: 7988058-7990648 Arabidopsis thaliana
AT4G13760 1.0kb downstream 1.0kb downstream 1000 false Chr4: 7989649-7990648 Arabidopsis thaliana
AT4G13760 2.0kb upstream 2.0kb upstream 3591 true Chr4: 7986058-7989648 Arabidopsis thaliana
AT4G13760 2.0kb upstream 2.0kb upstream 2000 false Chr4: 7986058-7988057 Arabidopsis thaliana
AT4G13760 2.0kb downstream 2.0kb downstream 3591 true Chr4: 7988058-7991648 Arabidopsis thaliana
AT4G13760 2.0kb downstream 2.0kb downstream 2000 false Chr4: 7989649-7991648 Arabidopsis thaliana
AT4G13760 5.0kb upstream 5.0kb upstream 6591 true Chr4: 7983058-7989648 Arabidopsis thaliana
AT4G13760 5.0kb upstream 5.0kb upstream 5000 false Chr4: 7983058-7988057 Arabidopsis thaliana
AT4G13760 5.0kb downstream 5.0kb downstream 6591 true Chr4: 7988058-7994648 Arabidopsis thaliana
AT4G13760 5.0kb downstream 5.0kb downstream 5000 false Chr4: 7989649-7994648 Arabidopsis thaliana
AT4G13760 10.0kb upstream 10.0kb upstream 11591 true Chr4: 7978058-7989648 Arabidopsis thaliana
AT4G13760 10.0kb upstream 10.0kb upstream 10000 false Chr4: 7978058-7988057 Arabidopsis thaliana
AT4G13760 10.0kb downstream 10.0kb downstream 11591 true Chr4: 7988058-7999648 Arabidopsis thaliana
AT4G13760 10.0kb downstream 10.0kb downstream 10000 false Chr4: 7989649-7999648 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122330516 5261 Brassicaceae Singleton cluster - no MSA
123771754 5264 Brassicales-Malvales Singleton cluster - no MSA
124270280 5266 SBM Singleton cluster - no MSA
124255183 5268 Malvidae View MSA
123953106 5270 Rosid View MSA
123758331 5271 Pentapetalae View MSA
122779296 5272 Eudicot View MSA
122051291 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain