Gene : AT4G13615 A. thaliana TAIR10
Defline:  (1 of 2) PTHR13596//PTHR13596:SF5 - SMALL EDRK-RICH FACTOR 1 // SUBFAMILY NOT NAMED Genomic Order:  1203
Name:  ? AT4G13615 Secondary Identifier:  ? PAC:19649071
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G13615 0.5kb upstream 0.5kb upstream 1315 true Chr4: 7923826-7925140 Arabidopsis thaliana
AT4G13615 0.5kb upstream 0.5kb upstream 500 false Chr4: 7923826-7924325 Arabidopsis thaliana
AT4G13615 0.5kb downstream 0.5kb downstream 1315 true Chr4: 7924326-7925640 Arabidopsis thaliana
AT4G13615 0.5kb downstream 0.5kb downstream 500 false Chr4: 7925141-7925640 Arabidopsis thaliana
AT4G13615 1.0kb upstream 1.0kb upstream 1815 true Chr4: 7923326-7925140 Arabidopsis thaliana
AT4G13615 1.0kb upstream 1.0kb upstream 1000 false Chr4: 7923326-7924325 Arabidopsis thaliana
AT4G13615 1.0kb downstream 1.0kb downstream 1815 true Chr4: 7924326-7926140 Arabidopsis thaliana
AT4G13615 1.0kb downstream 1.0kb downstream 1000 false Chr4: 7925141-7926140 Arabidopsis thaliana
AT4G13615 2.0kb upstream 2.0kb upstream 2815 true Chr4: 7922326-7925140 Arabidopsis thaliana
AT4G13615 2.0kb upstream 2.0kb upstream 2000 false Chr4: 7922326-7924325 Arabidopsis thaliana
AT4G13615 2.0kb downstream 2.0kb downstream 2815 true Chr4: 7924326-7927140 Arabidopsis thaliana
AT4G13615 2.0kb downstream 2.0kb downstream 2000 false Chr4: 7925141-7927140 Arabidopsis thaliana
AT4G13615 5.0kb upstream 5.0kb upstream 5815 true Chr4: 7919326-7925140 Arabidopsis thaliana
AT4G13615 5.0kb upstream 5.0kb upstream 5000 false Chr4: 7919326-7924325 Arabidopsis thaliana
AT4G13615 5.0kb downstream 5.0kb downstream 5815 true Chr4: 7924326-7930140 Arabidopsis thaliana
AT4G13615 5.0kb downstream 5.0kb downstream 5000 false Chr4: 7925141-7930140 Arabidopsis thaliana
AT4G13615 10.0kb upstream 10.0kb upstream 10815 true Chr4: 7914326-7925140 Arabidopsis thaliana
AT4G13615 10.0kb upstream 10.0kb upstream 10000 false Chr4: 7914326-7924325 Arabidopsis thaliana
AT4G13615 10.0kb downstream 10.0kb downstream 10815 true Chr4: 7924326-7935140 Arabidopsis thaliana
AT4G13615 10.0kb downstream 10.0kb downstream 10000 false Chr4: 7925141-7935140 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029149 5273 Angiosperm View MSA
122372905 5261 Brassicaceae View MSA
123839464 5264 Brassicales-Malvales View MSA
124343655 5266 SBM View MSA
124250071 5268 Malvidae View MSA
124074834 5270 Rosid View MSA
123749085 5271 Pentapetalae View MSA
122786752 5272 Eudicot View MSA
121349667 5274 Embryophyte View MSA
123424353 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 96.352     High  
cufflinks 93.361     High  
cufflinks 68.944     High Low
cufflinks 89.481     High  
cufflinks 70.556     High Low
cufflinks 95.68     High  

0 Strain