Gene : AT4G13440 A. thaliana TAIR10
Defline:  (1 of 20) PF13202 - EF hand (EF-hand_5) Genomic Order:  1184
Name:  ? AT4G13440 Secondary Identifier:  ? PAC:19647603
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G13440 0.5kb upstream 0.5kb upstream 965 true Chr4: 7809715-7810679 Arabidopsis thaliana
AT4G13440 0.5kb upstream 0.5kb upstream 500 false Chr4: 7809715-7810214 Arabidopsis thaliana
AT4G13440 0.5kb downstream 0.5kb downstream 965 true Chr4: 7810215-7811179 Arabidopsis thaliana
AT4G13440 0.5kb downstream 0.5kb downstream 500 false Chr4: 7810680-7811179 Arabidopsis thaliana
AT4G13440 1.0kb upstream 1.0kb upstream 1465 true Chr4: 7809215-7810679 Arabidopsis thaliana
AT4G13440 1.0kb upstream 1.0kb upstream 1000 false Chr4: 7809215-7810214 Arabidopsis thaliana
AT4G13440 1.0kb downstream 1.0kb downstream 1465 true Chr4: 7810215-7811679 Arabidopsis thaliana
AT4G13440 1.0kb downstream 1.0kb downstream 1000 false Chr4: 7810680-7811679 Arabidopsis thaliana
AT4G13440 2.0kb upstream 2.0kb upstream 2465 true Chr4: 7808215-7810679 Arabidopsis thaliana
AT4G13440 2.0kb upstream 2.0kb upstream 2000 false Chr4: 7808215-7810214 Arabidopsis thaliana
AT4G13440 2.0kb downstream 2.0kb downstream 2465 true Chr4: 7810215-7812679 Arabidopsis thaliana
AT4G13440 2.0kb downstream 2.0kb downstream 2000 false Chr4: 7810680-7812679 Arabidopsis thaliana
AT4G13440 5.0kb upstream 5.0kb upstream 5465 true Chr4: 7805215-7810679 Arabidopsis thaliana
AT4G13440 5.0kb upstream 5.0kb upstream 5000 false Chr4: 7805215-7810214 Arabidopsis thaliana
AT4G13440 5.0kb downstream 5.0kb downstream 5465 true Chr4: 7810215-7815679 Arabidopsis thaliana
AT4G13440 5.0kb downstream 5.0kb downstream 5000 false Chr4: 7810680-7815679 Arabidopsis thaliana
AT4G13440 10.0kb upstream 10.0kb upstream 10465 true Chr4: 7800215-7810679 Arabidopsis thaliana
AT4G13440 10.0kb upstream 10.0kb upstream 10000 false Chr4: 7800215-7810214 Arabidopsis thaliana
AT4G13440 10.0kb downstream 10.0kb downstream 10465 true Chr4: 7810215-7820679 Arabidopsis thaliana
AT4G13440 10.0kb downstream 10.0kb downstream 10000 false Chr4: 7810680-7820679 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791764 5273 Angiosperm View MSA
122330706 5261 Brassicaceae Singleton cluster - no MSA
123771932 5264 Brassicales-Malvales Singleton cluster - no MSA
124349670 5266 SBM View MSA
124248048 5268 Malvidae View MSA
124060835 5270 Rosid View MSA
123748103 5271 Pentapetalae View MSA
122790864 5272 Eudicot View MSA
121063058 5274 Embryophyte View MSA
123102843 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.228     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.965        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.081        

0 Strain