Gene : AMT1;1 A. thaliana TAIR10
Primary Identifier:  ? AT4G13510 Defline:  (1 of 6) K03320 - ammonium transporter, Amt family (amt, AMT, MEP)
Genomic Order:  1190 Name:  ? AT4G13510
Secondary Identifier:  ? PAC:19644262
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0 Pathways

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G13510 0.5kb upstream 0.5kb upstream 2236 true Chr4: 7857683-7859918 Arabidopsis thaliana
AT4G13510 0.5kb upstream 0.5kb upstream 500 false Chr4: 7857683-7858182 Arabidopsis thaliana
AT4G13510 0.5kb downstream 0.5kb downstream 2236 true Chr4: 7858183-7860418 Arabidopsis thaliana
AT4G13510 0.5kb downstream 0.5kb downstream 500 false Chr4: 7859919-7860418 Arabidopsis thaliana
AT4G13510 1.0kb upstream 1.0kb upstream 2736 true Chr4: 7857183-7859918 Arabidopsis thaliana
AT4G13510 1.0kb upstream 1.0kb upstream 1000 false Chr4: 7857183-7858182 Arabidopsis thaliana
AT4G13510 1.0kb downstream 1.0kb downstream 2736 true Chr4: 7858183-7860918 Arabidopsis thaliana
AT4G13510 1.0kb downstream 1.0kb downstream 1000 false Chr4: 7859919-7860918 Arabidopsis thaliana
AT4G13510 2.0kb upstream 2.0kb upstream 3736 true Chr4: 7856183-7859918 Arabidopsis thaliana
AT4G13510 2.0kb upstream 2.0kb upstream 2000 false Chr4: 7856183-7858182 Arabidopsis thaliana
AT4G13510 2.0kb downstream 2.0kb downstream 3736 true Chr4: 7858183-7861918 Arabidopsis thaliana
AT4G13510 2.0kb downstream 2.0kb downstream 2000 false Chr4: 7859919-7861918 Arabidopsis thaliana
AT4G13510 5.0kb upstream 5.0kb upstream 6736 true Chr4: 7853183-7859918 Arabidopsis thaliana
AT4G13510 5.0kb upstream 5.0kb upstream 5000 false Chr4: 7853183-7858182 Arabidopsis thaliana
AT4G13510 5.0kb downstream 5.0kb downstream 6736 true Chr4: 7858183-7864918 Arabidopsis thaliana
AT4G13510 5.0kb downstream 5.0kb downstream 5000 false Chr4: 7859919-7864918 Arabidopsis thaliana
AT4G13510 10.0kb upstream 10.0kb upstream 11736 true Chr4: 7848183-7859918 Arabidopsis thaliana
AT4G13510 10.0kb upstream 10.0kb upstream 10000 false Chr4: 7848183-7858182 Arabidopsis thaliana
AT4G13510 10.0kb downstream 10.0kb downstream 11736 true Chr4: 7858183-7869918 Arabidopsis thaliana
AT4G13510 10.0kb downstream 10.0kb downstream 10000 false Chr4: 7859919-7869918 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374830 5261 Brassicaceae View MSA
123830820 5264 Brassicales-Malvales View MSA
124345170 5266 SBM View MSA
124248749 5268 Malvidae View MSA
124067931 5270 Rosid View MSA
123740336 5271 Pentapetalae View MSA
122796645 5272 Eudicot View MSA
122042799 5273 Angiosperm View MSA
121344623 5274 Embryophyte View MSA
123426943 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 158.854     High High
cufflinks 8.305       Low
cufflinks 53.247     High  
cufflinks 18.278        
cufflinks 74.553     High  
cufflinks 9.493        

0 Strain