Gene : NIG A. thaliana TAIR10
Primary Identifier:  ? AT4G13350 Defline:  (1 of 1) PTHR23180:SF200 - ARF-GAP DOMAIN AND FG REPEAT-CONTAINING PROTEIN 1
Genomic Order:  1174 Name:  ? AT4G13350
Secondary Identifier:  ? PAC:19647118
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G13350 0.5kb upstream 0.5kb upstream 4546 true Chr4: 7769770-7774315 Arabidopsis thaliana
AT4G13350 0.5kb upstream 0.5kb upstream 500 false Chr4: 7773816-7774315 Arabidopsis thaliana
AT4G13350 0.5kb downstream 0.5kb downstream 4546 true Chr4: 7769270-7773815 Arabidopsis thaliana
AT4G13350 0.5kb downstream 0.5kb downstream 500 false Chr4: 7769270-7769769 Arabidopsis thaliana
AT4G13350 1.0kb upstream 1.0kb upstream 5046 true Chr4: 7769770-7774815 Arabidopsis thaliana
AT4G13350 1.0kb upstream 1.0kb upstream 1000 false Chr4: 7773816-7774815 Arabidopsis thaliana
AT4G13350 1.0kb downstream 1.0kb downstream 5046 true Chr4: 7768770-7773815 Arabidopsis thaliana
AT4G13350 1.0kb downstream 1.0kb downstream 1000 false Chr4: 7768770-7769769 Arabidopsis thaliana
AT4G13350 2.0kb upstream 2.0kb upstream 6046 true Chr4: 7769770-7775815 Arabidopsis thaliana
AT4G13350 2.0kb upstream 2.0kb upstream 2000 false Chr4: 7773816-7775815 Arabidopsis thaliana
AT4G13350 2.0kb downstream 2.0kb downstream 6046 true Chr4: 7767770-7773815 Arabidopsis thaliana
AT4G13350 2.0kb downstream 2.0kb downstream 2000 false Chr4: 7767770-7769769 Arabidopsis thaliana
AT4G13350 5.0kb upstream 5.0kb upstream 9046 true Chr4: 7769770-7778815 Arabidopsis thaliana
AT4G13350 5.0kb upstream 5.0kb upstream 5000 false Chr4: 7773816-7778815 Arabidopsis thaliana
AT4G13350 5.0kb downstream 5.0kb downstream 9046 true Chr4: 7764770-7773815 Arabidopsis thaliana
AT4G13350 5.0kb downstream 5.0kb downstream 5000 false Chr4: 7764770-7769769 Arabidopsis thaliana
AT4G13350 10.0kb upstream 10.0kb upstream 14046 true Chr4: 7769770-7783815 Arabidopsis thaliana
AT4G13350 10.0kb upstream 10.0kb upstream 10000 false Chr4: 7773816-7783815 Arabidopsis thaliana
AT4G13350 10.0kb downstream 10.0kb downstream 14046 true Chr4: 7759770-7773815 Arabidopsis thaliana
AT4G13350 10.0kb downstream 10.0kb downstream 10000 false Chr4: 7759770-7769769 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366464 5261 Brassicaceae View MSA
123836187 5264 Brassicales-Malvales View MSA
124351467 5266 SBM View MSA
124254198 5268 Malvidae View MSA
124064710 5270 Rosid View MSA
123751282 5271 Pentapetalae View MSA
122789552 5272 Eudicot View MSA
122042543 5273 Angiosperm View MSA
121351567 5274 Embryophyte View MSA
123428144 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.872       High
cufflinks 11.496        
cufflinks 7.794       Low
cufflinks 11.482        
cufflinks 8.768        
cufflinks 14.48        

0 Strain