Gene : ROPGEF9 A. thaliana TAIR10
Primary Identifier:  ? AT4G13240 Defline:  (1 of 5) PTHR33101//PTHR33101:SF10 - FAMILY NOT NAMED // RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 8-RELATED
Genomic Order:  1159 Name:  ? AT4G13240
Secondary Identifier:  ? PAC:19644480
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G13240 0.5kb upstream 0.5kb upstream 2970 true Chr4: 7679653-7682622 Arabidopsis thaliana
AT4G13240 0.5kb upstream 0.5kb upstream 500 false Chr4: 7679653-7680152 Arabidopsis thaliana
AT4G13240 0.5kb downstream 0.5kb downstream 2970 true Chr4: 7680153-7683122 Arabidopsis thaliana
AT4G13240 0.5kb downstream 0.5kb downstream 500 false Chr4: 7682623-7683122 Arabidopsis thaliana
AT4G13240 1.0kb upstream 1.0kb upstream 3470 true Chr4: 7679153-7682622 Arabidopsis thaliana
AT4G13240 1.0kb upstream 1.0kb upstream 1000 false Chr4: 7679153-7680152 Arabidopsis thaliana
AT4G13240 1.0kb downstream 1.0kb downstream 3470 true Chr4: 7680153-7683622 Arabidopsis thaliana
AT4G13240 1.0kb downstream 1.0kb downstream 1000 false Chr4: 7682623-7683622 Arabidopsis thaliana
AT4G13240 2.0kb upstream 2.0kb upstream 4470 true Chr4: 7678153-7682622 Arabidopsis thaliana
AT4G13240 2.0kb upstream 2.0kb upstream 2000 false Chr4: 7678153-7680152 Arabidopsis thaliana
AT4G13240 2.0kb downstream 2.0kb downstream 4470 true Chr4: 7680153-7684622 Arabidopsis thaliana
AT4G13240 2.0kb downstream 2.0kb downstream 2000 false Chr4: 7682623-7684622 Arabidopsis thaliana
AT4G13240 5.0kb upstream 5.0kb upstream 7470 true Chr4: 7675153-7682622 Arabidopsis thaliana
AT4G13240 5.0kb upstream 5.0kb upstream 5000 false Chr4: 7675153-7680152 Arabidopsis thaliana
AT4G13240 5.0kb downstream 5.0kb downstream 7470 true Chr4: 7680153-7687622 Arabidopsis thaliana
AT4G13240 5.0kb downstream 5.0kb downstream 5000 false Chr4: 7682623-7687622 Arabidopsis thaliana
AT4G13240 10.0kb upstream 10.0kb upstream 12470 true Chr4: 7670153-7682622 Arabidopsis thaliana
AT4G13240 10.0kb upstream 10.0kb upstream 10000 false Chr4: 7670153-7680152 Arabidopsis thaliana
AT4G13240 10.0kb downstream 10.0kb downstream 12470 true Chr4: 7680153-7692622 Arabidopsis thaliana
AT4G13240 10.0kb downstream 10.0kb downstream 10000 false Chr4: 7682623-7692622 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379701 5261 Brassicaceae View MSA
123839630 5264 Brassicales-Malvales View MSA
124340032 5266 SBM View MSA
124243474 5268 Malvidae View MSA
124069461 5270 Rosid View MSA
123751413 5271 Pentapetalae View MSA
122794787 5272 Eudicot View MSA
122041932 5273 Angiosperm View MSA
121309904 5274 Embryophyte View MSA
123347537 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.022     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.026     Low  

0 Strain