Gene : AT4G13270 A. thaliana TAIR10
Defline:  (1 of 46) PF03168 - Late embryogenesis abundant protein (LEA_2) Genomic Order:  1165
Name:  ? AT4G13270 Secondary Identifier:  ? PAC:19648995
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G13270 0.5kb upstream 0.5kb upstream 2513 true Chr4: 7730689-7733201 Arabidopsis thaliana
AT4G13270 0.5kb upstream 0.5kb upstream 500 false Chr4: 7730689-7731188 Arabidopsis thaliana
AT4G13270 0.5kb downstream 0.5kb downstream 2513 true Chr4: 7731189-7733701 Arabidopsis thaliana
AT4G13270 0.5kb downstream 0.5kb downstream 500 false Chr4: 7733202-7733701 Arabidopsis thaliana
AT4G13270 1.0kb upstream 1.0kb upstream 3013 true Chr4: 7730189-7733201 Arabidopsis thaliana
AT4G13270 1.0kb upstream 1.0kb upstream 1000 false Chr4: 7730189-7731188 Arabidopsis thaliana
AT4G13270 1.0kb downstream 1.0kb downstream 3013 true Chr4: 7731189-7734201 Arabidopsis thaliana
AT4G13270 1.0kb downstream 1.0kb downstream 1000 false Chr4: 7733202-7734201 Arabidopsis thaliana
AT4G13270 2.0kb upstream 2.0kb upstream 4013 true Chr4: 7729189-7733201 Arabidopsis thaliana
AT4G13270 2.0kb upstream 2.0kb upstream 2000 false Chr4: 7729189-7731188 Arabidopsis thaliana
AT4G13270 2.0kb downstream 2.0kb downstream 4013 true Chr4: 7731189-7735201 Arabidopsis thaliana
AT4G13270 2.0kb downstream 2.0kb downstream 2000 false Chr4: 7733202-7735201 Arabidopsis thaliana
AT4G13270 5.0kb upstream 5.0kb upstream 7013 true Chr4: 7726189-7733201 Arabidopsis thaliana
AT4G13270 5.0kb upstream 5.0kb upstream 5000 false Chr4: 7726189-7731188 Arabidopsis thaliana
AT4G13270 5.0kb downstream 5.0kb downstream 7013 true Chr4: 7731189-7738201 Arabidopsis thaliana
AT4G13270 5.0kb downstream 5.0kb downstream 5000 false Chr4: 7733202-7738201 Arabidopsis thaliana
AT4G13270 10.0kb upstream 10.0kb upstream 12013 true Chr4: 7721189-7733201 Arabidopsis thaliana
AT4G13270 10.0kb upstream 10.0kb upstream 10000 false Chr4: 7721189-7731188 Arabidopsis thaliana
AT4G13270 10.0kb downstream 10.0kb downstream 12013 true Chr4: 7731189-7743201 Arabidopsis thaliana
AT4G13270 10.0kb downstream 10.0kb downstream 10000 false Chr4: 7733202-7743201 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369948 5261 Brassicaceae View MSA
123838419 5264 Brassicales-Malvales View MSA
124344560 5266 SBM View MSA
124246401 5268 Malvidae View MSA
124071575 5270 Rosid View MSA
123738145 5271 Pentapetalae View MSA
122793617 5272 Eudicot View MSA
122049008 5273 Angiosperm View MSA
121350992 5274 Embryophyte View MSA
123381962 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.386        
cufflinks 20.449        
cufflinks 14.511       Low
cufflinks 21.084        
cufflinks 14.569       Low
cufflinks 18.922        

0 Strain