Gene : AT4G13160 A. thaliana TAIR10
Defline:  (1 of 16) PF04576 - Zein-binding (Zein-binding) Genomic Order:  1149
Name:  ? AT4G13160 Secondary Identifier:  ? PAC:19648525
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G13160 0.5kb upstream 0.5kb upstream 1779 true Chr4: 7653147-7654925 Arabidopsis thaliana
AT4G13160 0.5kb upstream 0.5kb upstream 500 false Chr4: 7653147-7653646 Arabidopsis thaliana
AT4G13160 0.5kb downstream 0.5kb downstream 1779 true Chr4: 7653647-7655425 Arabidopsis thaliana
AT4G13160 0.5kb downstream 0.5kb downstream 500 false Chr4: 7654926-7655425 Arabidopsis thaliana
AT4G13160 1.0kb upstream 1.0kb upstream 2279 true Chr4: 7652647-7654925 Arabidopsis thaliana
AT4G13160 1.0kb upstream 1.0kb upstream 1000 false Chr4: 7652647-7653646 Arabidopsis thaliana
AT4G13160 1.0kb downstream 1.0kb downstream 2279 true Chr4: 7653647-7655925 Arabidopsis thaliana
AT4G13160 1.0kb downstream 1.0kb downstream 1000 false Chr4: 7654926-7655925 Arabidopsis thaliana
AT4G13160 2.0kb upstream 2.0kb upstream 3279 true Chr4: 7651647-7654925 Arabidopsis thaliana
AT4G13160 2.0kb upstream 2.0kb upstream 2000 false Chr4: 7651647-7653646 Arabidopsis thaliana
AT4G13160 2.0kb downstream 2.0kb downstream 3279 true Chr4: 7653647-7656925 Arabidopsis thaliana
AT4G13160 2.0kb downstream 2.0kb downstream 2000 false Chr4: 7654926-7656925 Arabidopsis thaliana
AT4G13160 5.0kb upstream 5.0kb upstream 6279 true Chr4: 7648647-7654925 Arabidopsis thaliana
AT4G13160 5.0kb upstream 5.0kb upstream 5000 false Chr4: 7648647-7653646 Arabidopsis thaliana
AT4G13160 5.0kb downstream 5.0kb downstream 6279 true Chr4: 7653647-7659925 Arabidopsis thaliana
AT4G13160 5.0kb downstream 5.0kb downstream 5000 false Chr4: 7654926-7659925 Arabidopsis thaliana
AT4G13160 10.0kb upstream 10.0kb upstream 11279 true Chr4: 7643647-7654925 Arabidopsis thaliana
AT4G13160 10.0kb upstream 10.0kb upstream 10000 false Chr4: 7643647-7653646 Arabidopsis thaliana
AT4G13160 10.0kb downstream 10.0kb downstream 11279 true Chr4: 7653647-7664925 Arabidopsis thaliana
AT4G13160 10.0kb downstream 10.0kb downstream 10000 false Chr4: 7654926-7664925 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367247 5261 Brassicaceae View MSA
123799318 5264 Brassicales-Malvales View MSA
124296851 5266 SBM View MSA
124148891 5268 Malvidae View MSA
123874803 5270 Rosid View MSA
123458725 5271 Pentapetalae View MSA
122494124 5272 Eudicot View MSA
122048719 5273 Angiosperm View MSA
121351297 5274 Embryophyte View MSA
123382108 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.27        
cufflinks 14.781        
cufflinks 7.392       Low
cufflinks 16.651       High
cufflinks 6.918       Low
cufflinks 14.226        

0 Strain