Gene : PSAL A. thaliana TAIR10
Primary Identifier:  ? AT4G12800 Defline:  (1 of 1) K02699 - photosystem I subunit XI (psaL)
Genomic Order:  1112 Name:  ? AT4G12800
Secondary Identifier:  ? PAC:19644058
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PHOTOALL-PWY Arabidopsis thaliana pathologic  
Athaliana PWY-101 Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G12800 0.5kb upstream 0.5kb upstream 1849 true Chr4: 7520822-7522670 Arabidopsis thaliana
AT4G12800 0.5kb upstream 0.5kb upstream 500 false Chr4: 7520822-7521321 Arabidopsis thaliana
AT4G12800 0.5kb downstream 0.5kb downstream 1849 true Chr4: 7521322-7523170 Arabidopsis thaliana
AT4G12800 0.5kb downstream 0.5kb downstream 500 false Chr4: 7522671-7523170 Arabidopsis thaliana
AT4G12800 1.0kb upstream 1.0kb upstream 2349 true Chr4: 7520322-7522670 Arabidopsis thaliana
AT4G12800 1.0kb upstream 1.0kb upstream 1000 false Chr4: 7520322-7521321 Arabidopsis thaliana
AT4G12800 1.0kb downstream 1.0kb downstream 2349 true Chr4: 7521322-7523670 Arabidopsis thaliana
AT4G12800 1.0kb downstream 1.0kb downstream 1000 false Chr4: 7522671-7523670 Arabidopsis thaliana
AT4G12800 2.0kb upstream 2.0kb upstream 3349 true Chr4: 7519322-7522670 Arabidopsis thaliana
AT4G12800 2.0kb upstream 2.0kb upstream 2000 false Chr4: 7519322-7521321 Arabidopsis thaliana
AT4G12800 2.0kb downstream 2.0kb downstream 3349 true Chr4: 7521322-7524670 Arabidopsis thaliana
AT4G12800 2.0kb downstream 2.0kb downstream 2000 false Chr4: 7522671-7524670 Arabidopsis thaliana
AT4G12800 5.0kb upstream 5.0kb upstream 6349 true Chr4: 7516322-7522670 Arabidopsis thaliana
AT4G12800 5.0kb upstream 5.0kb upstream 5000 false Chr4: 7516322-7521321 Arabidopsis thaliana
AT4G12800 5.0kb downstream 5.0kb downstream 6349 true Chr4: 7521322-7527670 Arabidopsis thaliana
AT4G12800 5.0kb downstream 5.0kb downstream 5000 false Chr4: 7522671-7527670 Arabidopsis thaliana
AT4G12800 10.0kb upstream 10.0kb upstream 11349 true Chr4: 7511322-7522670 Arabidopsis thaliana
AT4G12800 10.0kb upstream 10.0kb upstream 10000 false Chr4: 7511322-7521321 Arabidopsis thaliana
AT4G12800 10.0kb downstream 10.0kb downstream 11349 true Chr4: 7521322-7532670 Arabidopsis thaliana
AT4G12800 10.0kb downstream 10.0kb downstream 10000 false Chr4: 7522671-7532670 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040995 5273 Angiosperm View MSA
122378869 5261 Brassicaceae View MSA
123838077 5264 Brassicales-Malvales View MSA
124343130 5266 SBM View MSA
124243038 5268 Malvidae View MSA
124061167 5270 Rosid View MSA
123750401 5271 Pentapetalae View MSA
122793402 5272 Eudicot View MSA
121343870 5274 Embryophyte View MSA
123424325 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1354.846     High  
cufflinks 6.192        
cufflinks 1727.34     High  
cufflinks 8.479        
cufflinks 1811.34     High  
cufflinks 3.852       Low

0 Strain