Gene : AT4G12840 A. thaliana TAIR10
Defline:  (1 of 11) PF05212 - Protein of unknown function (DUF707) (DUF707) Genomic Order:  1117
Name:  ? AT4G12840 Secondary Identifier:  ? PAC:19645987
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G12840 0.5kb upstream 0.5kb upstream 3325 true Chr4: 7533439-7536763 Arabidopsis thaliana
AT4G12840 0.5kb upstream 0.5kb upstream 500 false Chr4: 7536264-7536763 Arabidopsis thaliana
AT4G12840 0.5kb downstream 0.5kb downstream 3325 true Chr4: 7532939-7536263 Arabidopsis thaliana
AT4G12840 0.5kb downstream 0.5kb downstream 500 false Chr4: 7532939-7533438 Arabidopsis thaliana
AT4G12840 1.0kb upstream 1.0kb upstream 3825 true Chr4: 7533439-7537263 Arabidopsis thaliana
AT4G12840 1.0kb upstream 1.0kb upstream 1000 false Chr4: 7536264-7537263 Arabidopsis thaliana
AT4G12840 1.0kb downstream 1.0kb downstream 3825 true Chr4: 7532439-7536263 Arabidopsis thaliana
AT4G12840 1.0kb downstream 1.0kb downstream 1000 false Chr4: 7532439-7533438 Arabidopsis thaliana
AT4G12840 2.0kb upstream 2.0kb upstream 4825 true Chr4: 7533439-7538263 Arabidopsis thaliana
AT4G12840 2.0kb upstream 2.0kb upstream 2000 false Chr4: 7536264-7538263 Arabidopsis thaliana
AT4G12840 2.0kb downstream 2.0kb downstream 4825 true Chr4: 7531439-7536263 Arabidopsis thaliana
AT4G12840 2.0kb downstream 2.0kb downstream 2000 false Chr4: 7531439-7533438 Arabidopsis thaliana
AT4G12840 5.0kb upstream 5.0kb upstream 7825 true Chr4: 7533439-7541263 Arabidopsis thaliana
AT4G12840 5.0kb upstream 5.0kb upstream 5000 false Chr4: 7536264-7541263 Arabidopsis thaliana
AT4G12840 5.0kb downstream 5.0kb downstream 7825 true Chr4: 7528439-7536263 Arabidopsis thaliana
AT4G12840 5.0kb downstream 5.0kb downstream 5000 false Chr4: 7528439-7533438 Arabidopsis thaliana
AT4G12840 10.0kb upstream 10.0kb upstream 12825 true Chr4: 7533439-7546263 Arabidopsis thaliana
AT4G12840 10.0kb upstream 10.0kb upstream 10000 false Chr4: 7536264-7546263 Arabidopsis thaliana
AT4G12840 10.0kb downstream 10.0kb downstream 12825 true Chr4: 7523439-7536263 Arabidopsis thaliana
AT4G12840 10.0kb downstream 10.0kb downstream 10000 false Chr4: 7523439-7533438 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361085 5261 Brassicaceae View MSA
123833127 5264 Brassicales-Malvales View MSA
124321848 5266 SBM View MSA
124247897 5268 Malvidae View MSA
124070271 5270 Rosid View MSA
123749470 5271 Pentapetalae View MSA
122796901 5272 Eudicot View MSA
122044629 5273 Angiosperm View MSA
121349221 5274 Embryophyte View MSA
123381221 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.91        
cufflinks 3.196       High
cufflinks 0.683       Low
cufflinks 2.817        
cufflinks 0.711        
cufflinks 2.786        

0 Strain