Gene : AT4G12750 A. thaliana TAIR10
Defline:  (1 of 1) PTHR10390//PTHR10390:SF38 - HOMEOBOX PROTEIN SIX // HOMEODOMAIN-LIKE TRANSCRIPTIONAL REGULATOR Genomic Order:  1107
Name:  ? AT4G12750 Secondary Identifier:  ? PAC:19646344
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G12750 0.5kb upstream 0.5kb upstream 7403 true Chr4: 7497814-7505216 Arabidopsis thaliana
AT4G12750 0.5kb upstream 0.5kb upstream 500 false Chr4: 7504717-7505216 Arabidopsis thaliana
AT4G12750 0.5kb downstream 0.5kb downstream 7403 true Chr4: 7497314-7504716 Arabidopsis thaliana
AT4G12750 0.5kb downstream 0.5kb downstream 500 false Chr4: 7497314-7497813 Arabidopsis thaliana
AT4G12750 1.0kb upstream 1.0kb upstream 7903 true Chr4: 7497814-7505716 Arabidopsis thaliana
AT4G12750 1.0kb upstream 1.0kb upstream 1000 false Chr4: 7504717-7505716 Arabidopsis thaliana
AT4G12750 1.0kb downstream 1.0kb downstream 7903 true Chr4: 7496814-7504716 Arabidopsis thaliana
AT4G12750 1.0kb downstream 1.0kb downstream 1000 false Chr4: 7496814-7497813 Arabidopsis thaliana
AT4G12750 2.0kb upstream 2.0kb upstream 8903 true Chr4: 7497814-7506716 Arabidopsis thaliana
AT4G12750 2.0kb upstream 2.0kb upstream 2000 false Chr4: 7504717-7506716 Arabidopsis thaliana
AT4G12750 2.0kb downstream 2.0kb downstream 8903 true Chr4: 7495814-7504716 Arabidopsis thaliana
AT4G12750 2.0kb downstream 2.0kb downstream 2000 false Chr4: 7495814-7497813 Arabidopsis thaliana
AT4G12750 5.0kb upstream 5.0kb upstream 11903 true Chr4: 7497814-7509716 Arabidopsis thaliana
AT4G12750 5.0kb upstream 5.0kb upstream 5000 false Chr4: 7504717-7509716 Arabidopsis thaliana
AT4G12750 5.0kb downstream 5.0kb downstream 11903 true Chr4: 7492814-7504716 Arabidopsis thaliana
AT4G12750 5.0kb downstream 5.0kb downstream 5000 false Chr4: 7492814-7497813 Arabidopsis thaliana
AT4G12750 10.0kb upstream 10.0kb upstream 16903 true Chr4: 7497814-7514716 Arabidopsis thaliana
AT4G12750 10.0kb upstream 10.0kb upstream 10000 false Chr4: 7504717-7514716 Arabidopsis thaliana
AT4G12750 10.0kb downstream 10.0kb downstream 16903 true Chr4: 7487814-7504716 Arabidopsis thaliana
AT4G12750 10.0kb downstream 10.0kb downstream 10000 false Chr4: 7487814-7497813 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360998 5261 Brassicaceae View MSA
123838003 5264 Brassicales-Malvales View MSA
124337646 5266 SBM View MSA
124236967 5268 Malvidae View MSA
124073562 5270 Rosid View MSA
123738423 5271 Pentapetalae View MSA
122790469 5272 Eudicot View MSA
122046337 5273 Angiosperm View MSA
121310590 5274 Embryophyte View MSA
123427491 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.403        
cufflinks 4.35       High
cufflinks 3.265        
cufflinks 4.231        
cufflinks 2.771       Low
cufflinks 3.984        

0 Strain