Gene : AT4G12760 A. thaliana TAIR10
Defline:  (1 of 1) PTHR31742:SF1 - RPA-INTERACTING PROTEIN Genomic Order:  1108
Name:  ? AT4G12760 Secondary Identifier:  ? PAC:19646560
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G12760 0.5kb upstream 0.5kb upstream 1904 true Chr4: 7504352-7506255 Arabidopsis thaliana
AT4G12760 0.5kb upstream 0.5kb upstream 500 false Chr4: 7504352-7504851 Arabidopsis thaliana
AT4G12760 0.5kb downstream 0.5kb downstream 1904 true Chr4: 7504852-7506755 Arabidopsis thaliana
AT4G12760 0.5kb downstream 0.5kb downstream 500 false Chr4: 7506256-7506755 Arabidopsis thaliana
AT4G12760 1.0kb upstream 1.0kb upstream 2404 true Chr4: 7503852-7506255 Arabidopsis thaliana
AT4G12760 1.0kb upstream 1.0kb upstream 1000 false Chr4: 7503852-7504851 Arabidopsis thaliana
AT4G12760 1.0kb downstream 1.0kb downstream 2404 true Chr4: 7504852-7507255 Arabidopsis thaliana
AT4G12760 1.0kb downstream 1.0kb downstream 1000 false Chr4: 7506256-7507255 Arabidopsis thaliana
AT4G12760 2.0kb upstream 2.0kb upstream 3404 true Chr4: 7502852-7506255 Arabidopsis thaliana
AT4G12760 2.0kb upstream 2.0kb upstream 2000 false Chr4: 7502852-7504851 Arabidopsis thaliana
AT4G12760 2.0kb downstream 2.0kb downstream 3404 true Chr4: 7504852-7508255 Arabidopsis thaliana
AT4G12760 2.0kb downstream 2.0kb downstream 2000 false Chr4: 7506256-7508255 Arabidopsis thaliana
AT4G12760 5.0kb upstream 5.0kb upstream 6404 true Chr4: 7499852-7506255 Arabidopsis thaliana
AT4G12760 5.0kb upstream 5.0kb upstream 5000 false Chr4: 7499852-7504851 Arabidopsis thaliana
AT4G12760 5.0kb downstream 5.0kb downstream 6404 true Chr4: 7504852-7511255 Arabidopsis thaliana
AT4G12760 5.0kb downstream 5.0kb downstream 5000 false Chr4: 7506256-7511255 Arabidopsis thaliana
AT4G12760 10.0kb upstream 10.0kb upstream 11404 true Chr4: 7494852-7506255 Arabidopsis thaliana
AT4G12760 10.0kb upstream 10.0kb upstream 10000 false Chr4: 7494852-7504851 Arabidopsis thaliana
AT4G12760 10.0kb downstream 10.0kb downstream 11404 true Chr4: 7504852-7516255 Arabidopsis thaliana
AT4G12760 10.0kb downstream 10.0kb downstream 10000 false Chr4: 7506256-7516255 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369563 5261 Brassicaceae View MSA
123829444 5264 Brassicales-Malvales View MSA
124341150 5266 SBM View MSA
124237734 5268 Malvidae View MSA
124061489 5270 Rosid View MSA
123739858 5271 Pentapetalae View MSA
122789905 5272 Eudicot View MSA
122044802 5273 Angiosperm View MSA
121346952 5274 Embryophyte View MSA
123424751 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.443        
cufflinks 15.682       High
cufflinks 9.964        
cufflinks 15.693       High
cufflinks 8.848       Low
cufflinks 11.01        

0 Strain