Gene : RAP74 A. thaliana TAIR10
Primary Identifier:  ? AT4G12610 Defline:  (1 of 1) K03138 - transcription initiation factor TFIIF subunit alpha (TFIIF1, GTF2F1, TFG1)
Genomic Order:  1092 Name:  ? AT4G12610
Secondary Identifier:  ? PAC:19644088
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G12610 0.5kb upstream 0.5kb upstream 4080 true Chr4: 7454239-7458318 Arabidopsis thaliana
AT4G12610 0.5kb upstream 0.5kb upstream 500 false Chr4: 7454239-7454738 Arabidopsis thaliana
AT4G12610 0.5kb downstream 0.5kb downstream 4080 true Chr4: 7454739-7458818 Arabidopsis thaliana
AT4G12610 0.5kb downstream 0.5kb downstream 500 false Chr4: 7458319-7458818 Arabidopsis thaliana
AT4G12610 1.0kb upstream 1.0kb upstream 4580 true Chr4: 7453739-7458318 Arabidopsis thaliana
AT4G12610 1.0kb upstream 1.0kb upstream 1000 false Chr4: 7453739-7454738 Arabidopsis thaliana
AT4G12610 1.0kb downstream 1.0kb downstream 4580 true Chr4: 7454739-7459318 Arabidopsis thaliana
AT4G12610 1.0kb downstream 1.0kb downstream 1000 false Chr4: 7458319-7459318 Arabidopsis thaliana
AT4G12610 2.0kb upstream 2.0kb upstream 5580 true Chr4: 7452739-7458318 Arabidopsis thaliana
AT4G12610 2.0kb upstream 2.0kb upstream 2000 false Chr4: 7452739-7454738 Arabidopsis thaliana
AT4G12610 2.0kb downstream 2.0kb downstream 5580 true Chr4: 7454739-7460318 Arabidopsis thaliana
AT4G12610 2.0kb downstream 2.0kb downstream 2000 false Chr4: 7458319-7460318 Arabidopsis thaliana
AT4G12610 5.0kb upstream 5.0kb upstream 8580 true Chr4: 7449739-7458318 Arabidopsis thaliana
AT4G12610 5.0kb upstream 5.0kb upstream 5000 false Chr4: 7449739-7454738 Arabidopsis thaliana
AT4G12610 5.0kb downstream 5.0kb downstream 8580 true Chr4: 7454739-7463318 Arabidopsis thaliana
AT4G12610 5.0kb downstream 5.0kb downstream 5000 false Chr4: 7458319-7463318 Arabidopsis thaliana
AT4G12610 10.0kb upstream 10.0kb upstream 13580 true Chr4: 7444739-7458318 Arabidopsis thaliana
AT4G12610 10.0kb upstream 10.0kb upstream 10000 false Chr4: 7444739-7454738 Arabidopsis thaliana
AT4G12610 10.0kb downstream 10.0kb downstream 13580 true Chr4: 7454739-7468318 Arabidopsis thaliana
AT4G12610 10.0kb downstream 10.0kb downstream 10000 false Chr4: 7458319-7468318 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122330379 5261 Brassicaceae Singleton cluster - no MSA
123836960 5264 Brassicales-Malvales View MSA
124341306 5266 SBM View MSA
124237328 5268 Malvidae View MSA
124061584 5270 Rosid View MSA
123740754 5271 Pentapetalae View MSA
122785795 5272 Eudicot View MSA
122042161 5273 Angiosperm View MSA
121347251 5274 Embryophyte View MSA
123426399 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.731        
cufflinks 8.819        
cufflinks 5.545        
cufflinks 8.799        
cufflinks 5.665        
cufflinks 9.46       High

0 Strain