Gene : AT4G12710 A. thaliana TAIR10
Defline:  (1 of 1) PTHR23315:SF88 - ARM REPEAT PROTEIN Genomic Order:  1101
Name:  ? AT4G12710 Secondary Identifier:  ? PAC:19645755
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-7511 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G12710 0.5kb upstream 0.5kb upstream 2465 true Chr4: 7484837-7487301 Arabidopsis thaliana
AT4G12710 0.5kb upstream 0.5kb upstream 500 false Chr4: 7486802-7487301 Arabidopsis thaliana
AT4G12710 0.5kb downstream 0.5kb downstream 2465 true Chr4: 7484337-7486801 Arabidopsis thaliana
AT4G12710 0.5kb downstream 0.5kb downstream 500 false Chr4: 7484337-7484836 Arabidopsis thaliana
AT4G12710 1.0kb upstream 1.0kb upstream 2965 true Chr4: 7484837-7487801 Arabidopsis thaliana
AT4G12710 1.0kb upstream 1.0kb upstream 1000 false Chr4: 7486802-7487801 Arabidopsis thaliana
AT4G12710 1.0kb downstream 1.0kb downstream 2965 true Chr4: 7483837-7486801 Arabidopsis thaliana
AT4G12710 1.0kb downstream 1.0kb downstream 1000 false Chr4: 7483837-7484836 Arabidopsis thaliana
AT4G12710 2.0kb upstream 2.0kb upstream 3965 true Chr4: 7484837-7488801 Arabidopsis thaliana
AT4G12710 2.0kb upstream 2.0kb upstream 2000 false Chr4: 7486802-7488801 Arabidopsis thaliana
AT4G12710 2.0kb downstream 2.0kb downstream 3965 true Chr4: 7482837-7486801 Arabidopsis thaliana
AT4G12710 2.0kb downstream 2.0kb downstream 2000 false Chr4: 7482837-7484836 Arabidopsis thaliana
AT4G12710 5.0kb upstream 5.0kb upstream 6965 true Chr4: 7484837-7491801 Arabidopsis thaliana
AT4G12710 5.0kb upstream 5.0kb upstream 5000 false Chr4: 7486802-7491801 Arabidopsis thaliana
AT4G12710 5.0kb downstream 5.0kb downstream 6965 true Chr4: 7479837-7486801 Arabidopsis thaliana
AT4G12710 5.0kb downstream 5.0kb downstream 5000 false Chr4: 7479837-7484836 Arabidopsis thaliana
AT4G12710 10.0kb upstream 10.0kb upstream 11965 true Chr4: 7484837-7496801 Arabidopsis thaliana
AT4G12710 10.0kb upstream 10.0kb upstream 10000 false Chr4: 7486802-7496801 Arabidopsis thaliana
AT4G12710 10.0kb downstream 10.0kb downstream 11965 true Chr4: 7474837-7486801 Arabidopsis thaliana
AT4G12710 10.0kb downstream 10.0kb downstream 10000 false Chr4: 7474837-7484836 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343344 5261 Brassicaceae View MSA
123833869 5264 Brassicales-Malvales View MSA
124338499 5266 SBM View MSA
124250559 5268 Malvidae View MSA
124062792 5270 Rosid View MSA
123747212 5271 Pentapetalae View MSA
122790234 5272 Eudicot View MSA
122044762 5273 Angiosperm View MSA
121310337 5274 Embryophyte View MSA
123347849 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.139        
cufflinks 6.216        
cufflinks 3.298       Low
cufflinks 7.078       High
cufflinks 3.688        
cufflinks 6.859        

0 Strain