Gene : AT4G12520 A. thaliana TAIR10
Defline:  (1 of 26) PF14547 - Hydrophobic seed protein (Hydrophob_seed) Genomic Order:  1082
Name:  ? AT4G12520 Secondary Identifier:  ? PAC:19645862
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G12520 0.5kb upstream 0.5kb upstream 1183 true Chr4: 7421056-7422238 Arabidopsis thaliana
AT4G12520 0.5kb upstream 0.5kb upstream 500 false Chr4: 7421739-7422238 Arabidopsis thaliana
AT4G12520 0.5kb downstream 0.5kb downstream 1183 true Chr4: 7420556-7421738 Arabidopsis thaliana
AT4G12520 0.5kb downstream 0.5kb downstream 500 false Chr4: 7420556-7421055 Arabidopsis thaliana
AT4G12520 1.0kb upstream 1.0kb upstream 1683 true Chr4: 7421056-7422738 Arabidopsis thaliana
AT4G12520 1.0kb upstream 1.0kb upstream 1000 false Chr4: 7421739-7422738 Arabidopsis thaliana
AT4G12520 1.0kb downstream 1.0kb downstream 1683 true Chr4: 7420056-7421738 Arabidopsis thaliana
AT4G12520 1.0kb downstream 1.0kb downstream 1000 false Chr4: 7420056-7421055 Arabidopsis thaliana
AT4G12520 2.0kb upstream 2.0kb upstream 2683 true Chr4: 7421056-7423738 Arabidopsis thaliana
AT4G12520 2.0kb upstream 2.0kb upstream 2000 false Chr4: 7421739-7423738 Arabidopsis thaliana
AT4G12520 2.0kb downstream 2.0kb downstream 2683 true Chr4: 7419056-7421738 Arabidopsis thaliana
AT4G12520 2.0kb downstream 2.0kb downstream 2000 false Chr4: 7419056-7421055 Arabidopsis thaliana
AT4G12520 5.0kb upstream 5.0kb upstream 5683 true Chr4: 7421056-7426738 Arabidopsis thaliana
AT4G12520 5.0kb upstream 5.0kb upstream 5000 false Chr4: 7421739-7426738 Arabidopsis thaliana
AT4G12520 5.0kb downstream 5.0kb downstream 5683 true Chr4: 7416056-7421738 Arabidopsis thaliana
AT4G12520 5.0kb downstream 5.0kb downstream 5000 false Chr4: 7416056-7421055 Arabidopsis thaliana
AT4G12520 10.0kb upstream 10.0kb upstream 10683 true Chr4: 7421056-7431738 Arabidopsis thaliana
AT4G12520 10.0kb upstream 10.0kb upstream 10000 false Chr4: 7421739-7431738 Arabidopsis thaliana
AT4G12520 10.0kb downstream 10.0kb downstream 10683 true Chr4: 7411056-7421738 Arabidopsis thaliana
AT4G12520 10.0kb downstream 10.0kb downstream 10000 false Chr4: 7411056-7421055 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380123 5261 Brassicaceae View MSA
123836715 5264 Brassicales-Malvales View MSA
124342159 5266 SBM View MSA
124253928 5268 Malvidae View MSA
124070739 5270 Rosid View MSA
123753397 5271 Pentapetalae View MSA
122797404 5272 Eudicot View MSA
122050019 5273 Angiosperm View MSA
123429239 5275 Viridiplantae View MSA
121311688 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.63        
cufflinks 4.131        
cufflinks 0.75        
cufflinks 13.197        
cufflinks 0.08     Low Low
cufflinks 25.276       High

0 Strain