Gene : AT4G12545 A. thaliana TAIR10
Defline:  (1 of 26) PF14547 - Hydrophobic seed protein (Hydrophob_seed) Genomic Order:  1085
Name:  ? AT4G12545 Secondary Identifier:  ? PAC:19645276
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G12545 0.5kb upstream 0.5kb upstream 1160 true Chr4: 7433699-7434858 Arabidopsis thaliana
AT4G12545 0.5kb upstream 0.5kb upstream 500 false Chr4: 7433699-7434198 Arabidopsis thaliana
AT4G12545 0.5kb downstream 0.5kb downstream 1160 true Chr4: 7434199-7435358 Arabidopsis thaliana
AT4G12545 0.5kb downstream 0.5kb downstream 500 false Chr4: 7434859-7435358 Arabidopsis thaliana
AT4G12545 1.0kb upstream 1.0kb upstream 1660 true Chr4: 7433199-7434858 Arabidopsis thaliana
AT4G12545 1.0kb upstream 1.0kb upstream 1000 false Chr4: 7433199-7434198 Arabidopsis thaliana
AT4G12545 1.0kb downstream 1.0kb downstream 1660 true Chr4: 7434199-7435858 Arabidopsis thaliana
AT4G12545 1.0kb downstream 1.0kb downstream 1000 false Chr4: 7434859-7435858 Arabidopsis thaliana
AT4G12545 2.0kb upstream 2.0kb upstream 2660 true Chr4: 7432199-7434858 Arabidopsis thaliana
AT4G12545 2.0kb upstream 2.0kb upstream 2000 false Chr4: 7432199-7434198 Arabidopsis thaliana
AT4G12545 2.0kb downstream 2.0kb downstream 2660 true Chr4: 7434199-7436858 Arabidopsis thaliana
AT4G12545 2.0kb downstream 2.0kb downstream 2000 false Chr4: 7434859-7436858 Arabidopsis thaliana
AT4G12545 5.0kb upstream 5.0kb upstream 5660 true Chr4: 7429199-7434858 Arabidopsis thaliana
AT4G12545 5.0kb upstream 5.0kb upstream 5000 false Chr4: 7429199-7434198 Arabidopsis thaliana
AT4G12545 5.0kb downstream 5.0kb downstream 5660 true Chr4: 7434199-7439858 Arabidopsis thaliana
AT4G12545 5.0kb downstream 5.0kb downstream 5000 false Chr4: 7434859-7439858 Arabidopsis thaliana
AT4G12545 10.0kb upstream 10.0kb upstream 10660 true Chr4: 7424199-7434858 Arabidopsis thaliana
AT4G12545 10.0kb upstream 10.0kb upstream 10000 false Chr4: 7424199-7434198 Arabidopsis thaliana
AT4G12545 10.0kb downstream 10.0kb downstream 10660 true Chr4: 7434199-7444858 Arabidopsis thaliana
AT4G12545 10.0kb downstream 10.0kb downstream 10000 false Chr4: 7434859-7444858 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381503 5261 Brassicaceae View MSA
123841900 5264 Brassicales-Malvales View MSA
124352038 5266 SBM View MSA
124253928 5268 Malvidae View MSA
124070739 5270 Rosid View MSA
123753397 5271 Pentapetalae View MSA
122797404 5272 Eudicot View MSA
122050019 5273 Angiosperm View MSA
123429239 5275 Viridiplantae View MSA
121311688 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.131     Low  
cufflinks 0.438        
cufflinks 0.13     Low  
cufflinks 0.519        
cufflinks 0.255        
cufflinks 11.136       High

0 Strain