Gene : AT4G12410 A. thaliana TAIR10
Defline:  (1 of 4) PTHR31374//PTHR31374:SF56 - FAMILY NOT NAMED // AUXIN-REGULATED PROTEIN-RELATED Genomic Order:  1070
Name:  ? AT4G12410 Secondary Identifier:  ? PAC:19648625
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G12410 0.5kb upstream 0.5kb upstream 1135 true Chr4: 7342956-7344090 Arabidopsis thaliana
AT4G12410 0.5kb upstream 0.5kb upstream 500 false Chr4: 7343591-7344090 Arabidopsis thaliana
AT4G12410 0.5kb downstream 0.5kb downstream 1135 true Chr4: 7342456-7343590 Arabidopsis thaliana
AT4G12410 0.5kb downstream 0.5kb downstream 500 false Chr4: 7342456-7342955 Arabidopsis thaliana
AT4G12410 1.0kb upstream 1.0kb upstream 1635 true Chr4: 7342956-7344590 Arabidopsis thaliana
AT4G12410 1.0kb upstream 1.0kb upstream 1000 false Chr4: 7343591-7344590 Arabidopsis thaliana
AT4G12410 1.0kb downstream 1.0kb downstream 1635 true Chr4: 7341956-7343590 Arabidopsis thaliana
AT4G12410 1.0kb downstream 1.0kb downstream 1000 false Chr4: 7341956-7342955 Arabidopsis thaliana
AT4G12410 2.0kb upstream 2.0kb upstream 2635 true Chr4: 7342956-7345590 Arabidopsis thaliana
AT4G12410 2.0kb upstream 2.0kb upstream 2000 false Chr4: 7343591-7345590 Arabidopsis thaliana
AT4G12410 2.0kb downstream 2.0kb downstream 2635 true Chr4: 7340956-7343590 Arabidopsis thaliana
AT4G12410 2.0kb downstream 2.0kb downstream 2000 false Chr4: 7340956-7342955 Arabidopsis thaliana
AT4G12410 5.0kb upstream 5.0kb upstream 5635 true Chr4: 7342956-7348590 Arabidopsis thaliana
AT4G12410 5.0kb upstream 5.0kb upstream 5000 false Chr4: 7343591-7348590 Arabidopsis thaliana
AT4G12410 5.0kb downstream 5.0kb downstream 5635 true Chr4: 7337956-7343590 Arabidopsis thaliana
AT4G12410 5.0kb downstream 5.0kb downstream 5000 false Chr4: 7337956-7342955 Arabidopsis thaliana
AT4G12410 10.0kb upstream 10.0kb upstream 10635 true Chr4: 7342956-7353590 Arabidopsis thaliana
AT4G12410 10.0kb upstream 10.0kb upstream 10000 false Chr4: 7343591-7353590 Arabidopsis thaliana
AT4G12410 10.0kb downstream 10.0kb downstream 10635 true Chr4: 7332956-7343590 Arabidopsis thaliana
AT4G12410 10.0kb downstream 10.0kb downstream 10000 false Chr4: 7332956-7342955 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367349 5261 Brassicaceae View MSA
123840084 5264 Brassicales-Malvales View MSA
124346439 5266 SBM View MSA
124236881 5268 Malvidae View MSA
124072293 5270 Rosid View MSA
123741344 5271 Pentapetalae View MSA
122791593 5272 Eudicot View MSA
122049926 5273 Angiosperm View MSA
121311651 5274 Embryophyte View MSA
123348921 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.638       Low
cufflinks 3.334        
cufflinks 1.982        
cufflinks 2.926        
cufflinks 0.698       Low
cufflinks 3.037        

0 Strain