Gene : AT4G15420 A. thaliana TAIR10
Defline:  (1 of 1) PTHR12555//PTHR12555:SF14 - UBIQUITIN FUSION DEGRADATON PROTEIN 1 // SUBFAMILY NOT NAMED Genomic Order:  1433
Name:  ? AT4G15420 Secondary Identifier:  ? PAC:19646180
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G15420 0.5kb upstream 0.5kb upstream 2872 true Chr4: 8823225-8826096 Arabidopsis thaliana
AT4G15420 0.5kb upstream 0.5kb upstream 500 false Chr4: 8823225-8823724 Arabidopsis thaliana
AT4G15420 0.5kb downstream 0.5kb downstream 2872 true Chr4: 8823725-8826596 Arabidopsis thaliana
AT4G15420 0.5kb downstream 0.5kb downstream 500 false Chr4: 8826097-8826596 Arabidopsis thaliana
AT4G15420 1.0kb upstream 1.0kb upstream 3372 true Chr4: 8822725-8826096 Arabidopsis thaliana
AT4G15420 1.0kb upstream 1.0kb upstream 1000 false Chr4: 8822725-8823724 Arabidopsis thaliana
AT4G15420 1.0kb downstream 1.0kb downstream 3372 true Chr4: 8823725-8827096 Arabidopsis thaliana
AT4G15420 1.0kb downstream 1.0kb downstream 1000 false Chr4: 8826097-8827096 Arabidopsis thaliana
AT4G15420 2.0kb upstream 2.0kb upstream 4372 true Chr4: 8821725-8826096 Arabidopsis thaliana
AT4G15420 2.0kb upstream 2.0kb upstream 2000 false Chr4: 8821725-8823724 Arabidopsis thaliana
AT4G15420 2.0kb downstream 2.0kb downstream 4372 true Chr4: 8823725-8828096 Arabidopsis thaliana
AT4G15420 2.0kb downstream 2.0kb downstream 2000 false Chr4: 8826097-8828096 Arabidopsis thaliana
AT4G15420 5.0kb upstream 5.0kb upstream 7372 true Chr4: 8818725-8826096 Arabidopsis thaliana
AT4G15420 5.0kb upstream 5.0kb upstream 5000 false Chr4: 8818725-8823724 Arabidopsis thaliana
AT4G15420 5.0kb downstream 5.0kb downstream 7372 true Chr4: 8823725-8831096 Arabidopsis thaliana
AT4G15420 5.0kb downstream 5.0kb downstream 5000 false Chr4: 8826097-8831096 Arabidopsis thaliana
AT4G15420 10.0kb upstream 10.0kb upstream 12372 true Chr4: 8813725-8826096 Arabidopsis thaliana
AT4G15420 10.0kb upstream 10.0kb upstream 10000 false Chr4: 8813725-8823724 Arabidopsis thaliana
AT4G15420 10.0kb downstream 10.0kb downstream 12372 true Chr4: 8823725-8836096 Arabidopsis thaliana
AT4G15420 10.0kb downstream 10.0kb downstream 10000 false Chr4: 8826097-8836096 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371318 5261 Brassicaceae View MSA
123834790 5264 Brassicales-Malvales View MSA
124342726 5266 SBM View MSA
124239941 5268 Malvidae View MSA
124065261 5270 Rosid View MSA
123736611 5271 Pentapetalae View MSA
122787635 5272 Eudicot View MSA
122046586 5273 Angiosperm View MSA
121347183 5274 Embryophyte View MSA
123428055 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.007        
cufflinks 9.305        
cufflinks 6.69       Low
cufflinks 11.001        
cufflinks 9.777        
cufflinks 10.387        

0 Strain