Gene : AT4G15450 A. thaliana TAIR10
Defline:  (1 of 3) PTHR21068:SF5 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MIL23-RELATED Genomic Order:  1436
Name:  ? AT4G15450 Secondary Identifier:  ? PAC:19648152
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G15450 0.5kb upstream 0.5kb upstream 2363 true Chr4: 8838914-8841276 Arabidopsis thaliana
AT4G15450 0.5kb upstream 0.5kb upstream 500 false Chr4: 8838914-8839413 Arabidopsis thaliana
AT4G15450 0.5kb downstream 0.5kb downstream 2363 true Chr4: 8839414-8841776 Arabidopsis thaliana
AT4G15450 0.5kb downstream 0.5kb downstream 500 false Chr4: 8841277-8841776 Arabidopsis thaliana
AT4G15450 1.0kb upstream 1.0kb upstream 2863 true Chr4: 8838414-8841276 Arabidopsis thaliana
AT4G15450 1.0kb upstream 1.0kb upstream 1000 false Chr4: 8838414-8839413 Arabidopsis thaliana
AT4G15450 1.0kb downstream 1.0kb downstream 2863 true Chr4: 8839414-8842276 Arabidopsis thaliana
AT4G15450 1.0kb downstream 1.0kb downstream 1000 false Chr4: 8841277-8842276 Arabidopsis thaliana
AT4G15450 2.0kb upstream 2.0kb upstream 3863 true Chr4: 8837414-8841276 Arabidopsis thaliana
AT4G15450 2.0kb upstream 2.0kb upstream 2000 false Chr4: 8837414-8839413 Arabidopsis thaliana
AT4G15450 2.0kb downstream 2.0kb downstream 3863 true Chr4: 8839414-8843276 Arabidopsis thaliana
AT4G15450 2.0kb downstream 2.0kb downstream 2000 false Chr4: 8841277-8843276 Arabidopsis thaliana
AT4G15450 5.0kb upstream 5.0kb upstream 6863 true Chr4: 8834414-8841276 Arabidopsis thaliana
AT4G15450 5.0kb upstream 5.0kb upstream 5000 false Chr4: 8834414-8839413 Arabidopsis thaliana
AT4G15450 5.0kb downstream 5.0kb downstream 6863 true Chr4: 8839414-8846276 Arabidopsis thaliana
AT4G15450 5.0kb downstream 5.0kb downstream 5000 false Chr4: 8841277-8846276 Arabidopsis thaliana
AT4G15450 10.0kb upstream 10.0kb upstream 11863 true Chr4: 8829414-8841276 Arabidopsis thaliana
AT4G15450 10.0kb upstream 10.0kb upstream 10000 false Chr4: 8829414-8839413 Arabidopsis thaliana
AT4G15450 10.0kb downstream 10.0kb downstream 11863 true Chr4: 8839414-8851276 Arabidopsis thaliana
AT4G15450 10.0kb downstream 10.0kb downstream 10000 false Chr4: 8841277-8851276 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026413 5273 Angiosperm View MSA
122363323 5261 Brassicaceae View MSA
123835408 5264 Brassicales-Malvales View MSA
124343666 5266 SBM View MSA
124243636 5268 Malvidae View MSA
124068163 5270 Rosid View MSA
123740247 5271 Pentapetalae View MSA
122787553 5272 Eudicot View MSA
121296318 5274 Embryophyte View MSA
123334500 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.631       Low
cufflinks 34.224     High  
cufflinks 25.508        
cufflinks 32.416     High  
cufflinks 21.407        
cufflinks 31.301     High  

0 Strain