Gene : AT4G15400 A. thaliana TAIR10
Defline:  (1 of 6) 2.3.1.160 - Vinorine synthase Genomic Order:  1429
Name:  ? AT4G15400 Secondary Identifier:  ? PAC:19646589
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G15400 0.5kb upstream 0.5kb upstream 2051 true Chr4: 8811928-8813978 Arabidopsis thaliana
AT4G15400 0.5kb upstream 0.5kb upstream 500 false Chr4: 8813479-8813978 Arabidopsis thaliana
AT4G15400 0.5kb downstream 0.5kb downstream 2051 true Chr4: 8811428-8813478 Arabidopsis thaliana
AT4G15400 0.5kb downstream 0.5kb downstream 500 false Chr4: 8811428-8811927 Arabidopsis thaliana
AT4G15400 1.0kb upstream 1.0kb upstream 2551 true Chr4: 8811928-8814478 Arabidopsis thaliana
AT4G15400 1.0kb upstream 1.0kb upstream 1000 false Chr4: 8813479-8814478 Arabidopsis thaliana
AT4G15400 1.0kb downstream 1.0kb downstream 2551 true Chr4: 8810928-8813478 Arabidopsis thaliana
AT4G15400 1.0kb downstream 1.0kb downstream 1000 false Chr4: 8810928-8811927 Arabidopsis thaliana
AT4G15400 2.0kb upstream 2.0kb upstream 3551 true Chr4: 8811928-8815478 Arabidopsis thaliana
AT4G15400 2.0kb upstream 2.0kb upstream 2000 false Chr4: 8813479-8815478 Arabidopsis thaliana
AT4G15400 2.0kb downstream 2.0kb downstream 3551 true Chr4: 8809928-8813478 Arabidopsis thaliana
AT4G15400 2.0kb downstream 2.0kb downstream 2000 false Chr4: 8809928-8811927 Arabidopsis thaliana
AT4G15400 5.0kb upstream 5.0kb upstream 6551 true Chr4: 8811928-8818478 Arabidopsis thaliana
AT4G15400 5.0kb upstream 5.0kb upstream 5000 false Chr4: 8813479-8818478 Arabidopsis thaliana
AT4G15400 5.0kb downstream 5.0kb downstream 6551 true Chr4: 8806928-8813478 Arabidopsis thaliana
AT4G15400 5.0kb downstream 5.0kb downstream 5000 false Chr4: 8806928-8811927 Arabidopsis thaliana
AT4G15400 10.0kb upstream 10.0kb upstream 11551 true Chr4: 8811928-8823478 Arabidopsis thaliana
AT4G15400 10.0kb upstream 10.0kb upstream 10000 false Chr4: 8813479-8823478 Arabidopsis thaliana
AT4G15400 10.0kb downstream 10.0kb downstream 11551 true Chr4: 8801928-8813478 Arabidopsis thaliana
AT4G15400 10.0kb downstream 10.0kb downstream 10000 false Chr4: 8801928-8811927 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380004 5261 Brassicaceae View MSA
123842111 5264 Brassicales-Malvales View MSA
124350984 5266 SBM View MSA
124254246 5268 Malvidae View MSA
124074856 5270 Rosid View MSA
123753544 5271 Pentapetalae View MSA
122797119 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.009     Low Low
cufflinks 1.848        
cufflinks 0.032     Low  
cufflinks 5.403       High
cufflinks 0.01     Low Low
cufflinks 3.343        

0 Strain