Gene : OASA1 A. thaliana TAIR10
Primary Identifier:  ? AT4G14880 Defline:  (1 of 2) PTHR10314//PTHR10314:SF101 - SER/THR DEHYDRATASE, TRP SYNTHASE // SUBFAMILY NOT NAMED
Genomic Order:  1365 Name:  ? AT4G14880
Secondary Identifier:  ? PAC:19646399
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana CYSTSYN-PWY Arabidopsis thaliana pathologic  
Athaliana PWY-6936 Arabidopsis thaliana pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G14880 0.5kb upstream 0.5kb upstream 3062 true Chr4: 8517960-8521021 Arabidopsis thaliana
AT4G14880 0.5kb upstream 0.5kb upstream 500 false Chr4: 8520522-8521021 Arabidopsis thaliana
AT4G14880 0.5kb downstream 0.5kb downstream 3062 true Chr4: 8517460-8520521 Arabidopsis thaliana
AT4G14880 0.5kb downstream 0.5kb downstream 500 false Chr4: 8517460-8517959 Arabidopsis thaliana
AT4G14880 1.0kb upstream 1.0kb upstream 3562 true Chr4: 8517960-8521521 Arabidopsis thaliana
AT4G14880 1.0kb upstream 1.0kb upstream 1000 false Chr4: 8520522-8521521 Arabidopsis thaliana
AT4G14880 1.0kb downstream 1.0kb downstream 3562 true Chr4: 8516960-8520521 Arabidopsis thaliana
AT4G14880 1.0kb downstream 1.0kb downstream 1000 false Chr4: 8516960-8517959 Arabidopsis thaliana
AT4G14880 2.0kb upstream 2.0kb upstream 4562 true Chr4: 8517960-8522521 Arabidopsis thaliana
AT4G14880 2.0kb upstream 2.0kb upstream 2000 false Chr4: 8520522-8522521 Arabidopsis thaliana
AT4G14880 2.0kb downstream 2.0kb downstream 4562 true Chr4: 8515960-8520521 Arabidopsis thaliana
AT4G14880 2.0kb downstream 2.0kb downstream 2000 false Chr4: 8515960-8517959 Arabidopsis thaliana
AT4G14880 5.0kb upstream 5.0kb upstream 7562 true Chr4: 8517960-8525521 Arabidopsis thaliana
AT4G14880 5.0kb upstream 5.0kb upstream 5000 false Chr4: 8520522-8525521 Arabidopsis thaliana
AT4G14880 5.0kb downstream 5.0kb downstream 7562 true Chr4: 8512960-8520521 Arabidopsis thaliana
AT4G14880 5.0kb downstream 5.0kb downstream 5000 false Chr4: 8512960-8517959 Arabidopsis thaliana
AT4G14880 10.0kb upstream 10.0kb upstream 12562 true Chr4: 8517960-8530521 Arabidopsis thaliana
AT4G14880 10.0kb upstream 10.0kb upstream 10000 false Chr4: 8520522-8530521 Arabidopsis thaliana
AT4G14880 10.0kb downstream 10.0kb downstream 12562 true Chr4: 8507960-8520521 Arabidopsis thaliana
AT4G14880 10.0kb downstream 10.0kb downstream 10000 false Chr4: 8507960-8517959 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368674 5261 Brassicaceae View MSA
123836685 5264 Brassicales-Malvales View MSA
124342961 5266 SBM View MSA
124246015 5268 Malvidae View MSA
124073485 5270 Rosid View MSA
123750353 5271 Pentapetalae View MSA
122787082 5272 Eudicot View MSA
122044204 5273 Angiosperm View MSA
121350970 5274 Embryophyte View MSA
123424805 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 43.019     High  
cufflinks 28.754        
cufflinks 47.823     High High
cufflinks 27.771       Low
cufflinks 44.023     High  
cufflinks 31.339     High  

0 Strain