Gene : AT4G14270 A. thaliana TAIR10
Defline:  (1 of 1) PTHR33790:SF4 - POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 2 Genomic Order:  1282
Name:  ? AT4G14270 Secondary Identifier:  ? PAC:19645468
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G14270 0.5kb upstream 0.5kb upstream 1445 true Chr4: 8217878-8219322 Arabidopsis thaliana
AT4G14270 0.5kb upstream 0.5kb upstream 500 false Chr4: 8217878-8218377 Arabidopsis thaliana
AT4G14270 0.5kb downstream 0.5kb downstream 1445 true Chr4: 8218378-8219822 Arabidopsis thaliana
AT4G14270 0.5kb downstream 0.5kb downstream 500 false Chr4: 8219323-8219822 Arabidopsis thaliana
AT4G14270 1.0kb upstream 1.0kb upstream 1945 true Chr4: 8217378-8219322 Arabidopsis thaliana
AT4G14270 1.0kb upstream 1.0kb upstream 1000 false Chr4: 8217378-8218377 Arabidopsis thaliana
AT4G14270 1.0kb downstream 1.0kb downstream 1945 true Chr4: 8218378-8220322 Arabidopsis thaliana
AT4G14270 1.0kb downstream 1.0kb downstream 1000 false Chr4: 8219323-8220322 Arabidopsis thaliana
AT4G14270 2.0kb upstream 2.0kb upstream 2945 true Chr4: 8216378-8219322 Arabidopsis thaliana
AT4G14270 2.0kb upstream 2.0kb upstream 2000 false Chr4: 8216378-8218377 Arabidopsis thaliana
AT4G14270 2.0kb downstream 2.0kb downstream 2945 true Chr4: 8218378-8221322 Arabidopsis thaliana
AT4G14270 2.0kb downstream 2.0kb downstream 2000 false Chr4: 8219323-8221322 Arabidopsis thaliana
AT4G14270 5.0kb upstream 5.0kb upstream 5945 true Chr4: 8213378-8219322 Arabidopsis thaliana
AT4G14270 5.0kb upstream 5.0kb upstream 5000 false Chr4: 8213378-8218377 Arabidopsis thaliana
AT4G14270 5.0kb downstream 5.0kb downstream 5945 true Chr4: 8218378-8224322 Arabidopsis thaliana
AT4G14270 5.0kb downstream 5.0kb downstream 5000 false Chr4: 8219323-8224322 Arabidopsis thaliana
AT4G14270 10.0kb upstream 10.0kb upstream 10945 true Chr4: 8208378-8219322 Arabidopsis thaliana
AT4G14270 10.0kb upstream 10.0kb upstream 10000 false Chr4: 8208378-8218377 Arabidopsis thaliana
AT4G14270 10.0kb downstream 10.0kb downstream 10945 true Chr4: 8218378-8229322 Arabidopsis thaliana
AT4G14270 10.0kb downstream 10.0kb downstream 10000 false Chr4: 8219323-8229322 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377711 5261 Brassicaceae View MSA
123801611 5264 Brassicales-Malvales View MSA
124298890 5266 SBM View MSA
124150431 5268 Malvidae View MSA
123876044 5270 Rosid View MSA
123459771 5271 Pentapetalae View MSA
122796171 5272 Eudicot View MSA
122048247 5273 Angiosperm View MSA
121345899 5274 Embryophyte View MSA
123380287 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 45.72     High Low
cufflinks 76.488     High  
cufflinks 47.53     High Low
cufflinks 102.188     High High
cufflinks 84.179     High  
cufflinks 65.651     High  

0 Strain