Gene : AT4G16610 A. thaliana TAIR10
Defline:  (1 of 43) PF13912 - C2H2-type zinc finger (zf-C2H2_6) Genomic Order:  1578
Name:  ? AT4G16610 Secondary Identifier:  ? PAC:19646042
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G16610 0.5kb upstream 0.5kb upstream 1467 true Chr4: 9354321-9355787 Arabidopsis thaliana
AT4G16610 0.5kb upstream 0.5kb upstream 500 false Chr4: 9355288-9355787 Arabidopsis thaliana
AT4G16610 0.5kb downstream 0.5kb downstream 1467 true Chr4: 9353821-9355287 Arabidopsis thaliana
AT4G16610 0.5kb downstream 0.5kb downstream 500 false Chr4: 9353821-9354320 Arabidopsis thaliana
AT4G16610 1.0kb upstream 1.0kb upstream 1967 true Chr4: 9354321-9356287 Arabidopsis thaliana
AT4G16610 1.0kb upstream 1.0kb upstream 1000 false Chr4: 9355288-9356287 Arabidopsis thaliana
AT4G16610 1.0kb downstream 1.0kb downstream 1967 true Chr4: 9353321-9355287 Arabidopsis thaliana
AT4G16610 1.0kb downstream 1.0kb downstream 1000 false Chr4: 9353321-9354320 Arabidopsis thaliana
AT4G16610 2.0kb upstream 2.0kb upstream 2967 true Chr4: 9354321-9357287 Arabidopsis thaliana
AT4G16610 2.0kb upstream 2.0kb upstream 2000 false Chr4: 9355288-9357287 Arabidopsis thaliana
AT4G16610 2.0kb downstream 2.0kb downstream 2967 true Chr4: 9352321-9355287 Arabidopsis thaliana
AT4G16610 2.0kb downstream 2.0kb downstream 2000 false Chr4: 9352321-9354320 Arabidopsis thaliana
AT4G16610 5.0kb upstream 5.0kb upstream 5967 true Chr4: 9354321-9360287 Arabidopsis thaliana
AT4G16610 5.0kb upstream 5.0kb upstream 5000 false Chr4: 9355288-9360287 Arabidopsis thaliana
AT4G16610 5.0kb downstream 5.0kb downstream 5967 true Chr4: 9349321-9355287 Arabidopsis thaliana
AT4G16610 5.0kb downstream 5.0kb downstream 5000 false Chr4: 9349321-9354320 Arabidopsis thaliana
AT4G16610 10.0kb upstream 10.0kb upstream 10967 true Chr4: 9354321-9365287 Arabidopsis thaliana
AT4G16610 10.0kb upstream 10.0kb upstream 10000 false Chr4: 9355288-9365287 Arabidopsis thaliana
AT4G16610 10.0kb downstream 10.0kb downstream 10967 true Chr4: 9344321-9355287 Arabidopsis thaliana
AT4G16610 10.0kb downstream 10.0kb downstream 10000 false Chr4: 9344321-9354320 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121512268 5273 Angiosperm View MSA
122381177 5261 Brassicaceae View MSA
123803103 5264 Brassicales-Malvales View MSA
124300238 5266 SBM View MSA
124151467 5268 Malvidae View MSA
123876895 5270 Rosid View MSA
123460505 5271 Pentapetalae View MSA
122495876 5272 Eudicot View MSA
120785291 5274 Embryophyte View MSA
122827161 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.293        
cufflinks 3.091        
cufflinks 0.729        
cufflinks 3.708        
cufflinks 0.431       Low
cufflinks 4.609       High

0 Strain