Gene : ARA1 A. thaliana TAIR10
Primary Identifier:  ? AT4G16130 Defline:  (1 of 2) 2.7.1.46 - L-arabinokinase
Genomic Order:  1516 Name:  ? AT4G16130
Secondary Identifier:  ? PAC:19645119
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-82 Arabidopsis thaliana pathologic  

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G16130 0.5kb upstream 0.5kb upstream 7572 true Chr4: 9120367-9127938 Arabidopsis thaliana
AT4G16130 0.5kb upstream 0.5kb upstream 500 false Chr4: 9120367-9120866 Arabidopsis thaliana
AT4G16130 0.5kb downstream 0.5kb downstream 7572 true Chr4: 9120867-9128438 Arabidopsis thaliana
AT4G16130 0.5kb downstream 0.5kb downstream 500 false Chr4: 9127939-9128438 Arabidopsis thaliana
AT4G16130 1.0kb upstream 1.0kb upstream 8072 true Chr4: 9119867-9127938 Arabidopsis thaliana
AT4G16130 1.0kb upstream 1.0kb upstream 1000 false Chr4: 9119867-9120866 Arabidopsis thaliana
AT4G16130 1.0kb downstream 1.0kb downstream 8072 true Chr4: 9120867-9128938 Arabidopsis thaliana
AT4G16130 1.0kb downstream 1.0kb downstream 1000 false Chr4: 9127939-9128938 Arabidopsis thaliana
AT4G16130 2.0kb upstream 2.0kb upstream 9072 true Chr4: 9118867-9127938 Arabidopsis thaliana
AT4G16130 2.0kb upstream 2.0kb upstream 2000 false Chr4: 9118867-9120866 Arabidopsis thaliana
AT4G16130 2.0kb downstream 2.0kb downstream 9072 true Chr4: 9120867-9129938 Arabidopsis thaliana
AT4G16130 2.0kb downstream 2.0kb downstream 2000 false Chr4: 9127939-9129938 Arabidopsis thaliana
AT4G16130 5.0kb upstream 5.0kb upstream 12072 true Chr4: 9115867-9127938 Arabidopsis thaliana
AT4G16130 5.0kb upstream 5.0kb upstream 5000 false Chr4: 9115867-9120866 Arabidopsis thaliana
AT4G16130 5.0kb downstream 5.0kb downstream 12072 true Chr4: 9120867-9132938 Arabidopsis thaliana
AT4G16130 5.0kb downstream 5.0kb downstream 5000 false Chr4: 9127939-9132938 Arabidopsis thaliana
AT4G16130 10.0kb upstream 10.0kb upstream 17072 true Chr4: 9110867-9127938 Arabidopsis thaliana
AT4G16130 10.0kb upstream 10.0kb upstream 10000 false Chr4: 9110867-9120866 Arabidopsis thaliana
AT4G16130 10.0kb downstream 10.0kb downstream 17072 true Chr4: 9120867-9137938 Arabidopsis thaliana
AT4G16130 10.0kb downstream 10.0kb downstream 10000 false Chr4: 9127939-9137938 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370489 5261 Brassicaceae View MSA
123834106 5264 Brassicales-Malvales View MSA
124336596 5266 SBM View MSA
124242808 5268 Malvidae View MSA
124063357 5270 Rosid View MSA
123744762 5271 Pentapetalae View MSA
122790860 5272 Eudicot View MSA
122044133 5273 Angiosperm View MSA
121345310 5274 Embryophyte View MSA
123424614 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.37        
cufflinks 5.712        
cufflinks 5.604        
cufflinks 6.679        
cufflinks 6.756       High
cufflinks 5.268       Low

0 Strain