Gene : RR2 A. thaliana TAIR10
Primary Identifier:  ? AT4G16110 Defline:  (1 of 2) PTHR26402:SF617 - TWO-COMPONENT RESPONSE REGULATOR ARR1-RELATED
Genomic Order:  1514 Name:  ? AT4G16110
Secondary Identifier:  ? PAC:19646673
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G16110 0.5kb upstream 0.5kb upstream 3979 true Chr4: 9112186-9116164 Arabidopsis thaliana
AT4G16110 0.5kb upstream 0.5kb upstream 500 false Chr4: 9112186-9112685 Arabidopsis thaliana
AT4G16110 0.5kb downstream 0.5kb downstream 3979 true Chr4: 9112686-9116664 Arabidopsis thaliana
AT4G16110 0.5kb downstream 0.5kb downstream 500 false Chr4: 9116165-9116664 Arabidopsis thaliana
AT4G16110 1.0kb upstream 1.0kb upstream 4479 true Chr4: 9111686-9116164 Arabidopsis thaliana
AT4G16110 1.0kb upstream 1.0kb upstream 1000 false Chr4: 9111686-9112685 Arabidopsis thaliana
AT4G16110 1.0kb downstream 1.0kb downstream 4479 true Chr4: 9112686-9117164 Arabidopsis thaliana
AT4G16110 1.0kb downstream 1.0kb downstream 1000 false Chr4: 9116165-9117164 Arabidopsis thaliana
AT4G16110 2.0kb upstream 2.0kb upstream 5479 true Chr4: 9110686-9116164 Arabidopsis thaliana
AT4G16110 2.0kb upstream 2.0kb upstream 2000 false Chr4: 9110686-9112685 Arabidopsis thaliana
AT4G16110 2.0kb downstream 2.0kb downstream 5479 true Chr4: 9112686-9118164 Arabidopsis thaliana
AT4G16110 2.0kb downstream 2.0kb downstream 2000 false Chr4: 9116165-9118164 Arabidopsis thaliana
AT4G16110 5.0kb upstream 5.0kb upstream 8479 true Chr4: 9107686-9116164 Arabidopsis thaliana
AT4G16110 5.0kb upstream 5.0kb upstream 5000 false Chr4: 9107686-9112685 Arabidopsis thaliana
AT4G16110 5.0kb downstream 5.0kb downstream 8479 true Chr4: 9112686-9121164 Arabidopsis thaliana
AT4G16110 5.0kb downstream 5.0kb downstream 5000 false Chr4: 9116165-9121164 Arabidopsis thaliana
AT4G16110 10.0kb upstream 10.0kb upstream 13479 true Chr4: 9102686-9116164 Arabidopsis thaliana
AT4G16110 10.0kb upstream 10.0kb upstream 10000 false Chr4: 9102686-9112685 Arabidopsis thaliana
AT4G16110 10.0kb downstream 10.0kb downstream 13479 true Chr4: 9112686-9126164 Arabidopsis thaliana
AT4G16110 10.0kb downstream 10.0kb downstream 10000 false Chr4: 9116165-9126164 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368385 5261 Brassicaceae View MSA
123837338 5264 Brassicales-Malvales View MSA
124344125 5266 SBM View MSA
124241603 5268 Malvidae View MSA
124061733 5270 Rosid View MSA
123739139 5271 Pentapetalae View MSA
122791223 5272 Eudicot View MSA
122048546 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121351259 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.557        
cufflinks 5.945        
cufflinks 2.925       Low
cufflinks 8.898       High
cufflinks 3.544        
cufflinks 6.172        

0 Strain