Gene : AT4G16146 A. thaliana TAIR10
Defline:  (1 of 1) PTHR34804:SF1 - CAMP-REGULATED PHOSPHOPROTEIN 19-RELATED PROTEIN Genomic Order:  1521
Name:  ? AT4G16146 Secondary Identifier:  ? PAC:19644303
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G16146 0.5kb upstream 0.5kb upstream 2680 true Chr4: 9142404-9145083 Arabidopsis thaliana
AT4G16146 0.5kb upstream 0.5kb upstream 500 false Chr4: 9144584-9145083 Arabidopsis thaliana
AT4G16146 0.5kb downstream 0.5kb downstream 2680 true Chr4: 9141904-9144583 Arabidopsis thaliana
AT4G16146 0.5kb downstream 0.5kb downstream 500 false Chr4: 9141904-9142403 Arabidopsis thaliana
AT4G16146 1.0kb upstream 1.0kb upstream 3180 true Chr4: 9142404-9145583 Arabidopsis thaliana
AT4G16146 1.0kb upstream 1.0kb upstream 1000 false Chr4: 9144584-9145583 Arabidopsis thaliana
AT4G16146 1.0kb downstream 1.0kb downstream 3180 true Chr4: 9141404-9144583 Arabidopsis thaliana
AT4G16146 1.0kb downstream 1.0kb downstream 1000 false Chr4: 9141404-9142403 Arabidopsis thaliana
AT4G16146 2.0kb upstream 2.0kb upstream 4180 true Chr4: 9142404-9146583 Arabidopsis thaliana
AT4G16146 2.0kb upstream 2.0kb upstream 2000 false Chr4: 9144584-9146583 Arabidopsis thaliana
AT4G16146 2.0kb downstream 2.0kb downstream 4180 true Chr4: 9140404-9144583 Arabidopsis thaliana
AT4G16146 2.0kb downstream 2.0kb downstream 2000 false Chr4: 9140404-9142403 Arabidopsis thaliana
AT4G16146 5.0kb upstream 5.0kb upstream 7180 true Chr4: 9142404-9149583 Arabidopsis thaliana
AT4G16146 5.0kb upstream 5.0kb upstream 5000 false Chr4: 9144584-9149583 Arabidopsis thaliana
AT4G16146 5.0kb downstream 5.0kb downstream 7180 true Chr4: 9137404-9144583 Arabidopsis thaliana
AT4G16146 5.0kb downstream 5.0kb downstream 5000 false Chr4: 9137404-9142403 Arabidopsis thaliana
AT4G16146 10.0kb upstream 10.0kb upstream 12180 true Chr4: 9142404-9154583 Arabidopsis thaliana
AT4G16146 10.0kb upstream 10.0kb upstream 10000 false Chr4: 9144584-9154583 Arabidopsis thaliana
AT4G16146 10.0kb downstream 10.0kb downstream 12180 true Chr4: 9132404-9144583 Arabidopsis thaliana
AT4G16146 10.0kb downstream 10.0kb downstream 10000 false Chr4: 9132404-9142403 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370836 5261 Brassicaceae View MSA
123831260 5264 Brassicales-Malvales View MSA
124344293 5266 SBM View MSA
124250509 5268 Malvidae View MSA
124060714 5270 Rosid View MSA
123751863 5271 Pentapetalae View MSA
122795534 5272 Eudicot View MSA
122049518 5273 Angiosperm View MSA
121345804 5274 Embryophyte View MSA
123427885 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.621        
cufflinks 1.023       Low
cufflinks 13.678        
cufflinks 1.929        
cufflinks 13.447        
cufflinks 1.134       Low

0 Strain