Gene : AT4G16150 A. thaliana TAIR10
Defline:  (1 of 2) PTHR23335//PTHR23335:SF3 - CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA // CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 5-RELATED Genomic Order:  1522
Name:  ? AT4G16150 Secondary Identifier:  ? PAC:19645161
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G16150 0.5kb upstream 0.5kb upstream 5734 true Chr4: 9147559-9153292 Arabidopsis thaliana
AT4G16150 0.5kb upstream 0.5kb upstream 500 false Chr4: 9147559-9148058 Arabidopsis thaliana
AT4G16150 0.5kb downstream 0.5kb downstream 5734 true Chr4: 9148059-9153792 Arabidopsis thaliana
AT4G16150 0.5kb downstream 0.5kb downstream 500 false Chr4: 9153293-9153792 Arabidopsis thaliana
AT4G16150 1.0kb upstream 1.0kb upstream 6234 true Chr4: 9147059-9153292 Arabidopsis thaliana
AT4G16150 1.0kb upstream 1.0kb upstream 1000 false Chr4: 9147059-9148058 Arabidopsis thaliana
AT4G16150 1.0kb downstream 1.0kb downstream 6234 true Chr4: 9148059-9154292 Arabidopsis thaliana
AT4G16150 1.0kb downstream 1.0kb downstream 1000 false Chr4: 9153293-9154292 Arabidopsis thaliana
AT4G16150 2.0kb upstream 2.0kb upstream 7234 true Chr4: 9146059-9153292 Arabidopsis thaliana
AT4G16150 2.0kb upstream 2.0kb upstream 2000 false Chr4: 9146059-9148058 Arabidopsis thaliana
AT4G16150 2.0kb downstream 2.0kb downstream 7234 true Chr4: 9148059-9155292 Arabidopsis thaliana
AT4G16150 2.0kb downstream 2.0kb downstream 2000 false Chr4: 9153293-9155292 Arabidopsis thaliana
AT4G16150 5.0kb upstream 5.0kb upstream 10234 true Chr4: 9143059-9153292 Arabidopsis thaliana
AT4G16150 5.0kb upstream 5.0kb upstream 5000 false Chr4: 9143059-9148058 Arabidopsis thaliana
AT4G16150 5.0kb downstream 5.0kb downstream 10234 true Chr4: 9148059-9158292 Arabidopsis thaliana
AT4G16150 5.0kb downstream 5.0kb downstream 5000 false Chr4: 9153293-9158292 Arabidopsis thaliana
AT4G16150 10.0kb upstream 10.0kb upstream 15234 true Chr4: 9138059-9153292 Arabidopsis thaliana
AT4G16150 10.0kb upstream 10.0kb upstream 10000 false Chr4: 9138059-9148058 Arabidopsis thaliana
AT4G16150 10.0kb downstream 10.0kb downstream 15234 true Chr4: 9148059-9163292 Arabidopsis thaliana
AT4G16150 10.0kb downstream 10.0kb downstream 10000 false Chr4: 9153293-9163292 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370222 5261 Brassicaceae View MSA
123835221 5264 Brassicales-Malvales View MSA
124337020 5266 SBM View MSA
124250326 5268 Malvidae View MSA
124060879 5270 Rosid View MSA
123739187 5271 Pentapetalae View MSA
122787070 5272 Eudicot View MSA
122044952 5273 Angiosperm View MSA
121310369 5274 Embryophyte View MSA
123347871 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.838        
cufflinks 18.064        
cufflinks 13.566       Low
cufflinks 20.78       High
cufflinks 17.288        
cufflinks 17.002        

0 Strain