Gene : NRPD4 A. thaliana TAIR10
Primary Identifier:  ? AT4G15950 Defline:  (1 of 1) PTHR21297//PTHR21297:SF2 - DNA-DIRECTED RNA POLYMERASE II // DNA-DIRECTED RNA POLYMERASES IV AND V SUBUNIT 4
Genomic Order:  1492 Name:  ? AT4G15950
Secondary Identifier:  ? PAC:19647213
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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G15950 0.5kb upstream 0.5kb upstream 1947 true Chr4: 9040183-9042129 Arabidopsis thaliana
AT4G15950 0.5kb upstream 0.5kb upstream 500 false Chr4: 9040183-9040682 Arabidopsis thaliana
AT4G15950 0.5kb downstream 0.5kb downstream 1947 true Chr4: 9040683-9042629 Arabidopsis thaliana
AT4G15950 0.5kb downstream 0.5kb downstream 500 false Chr4: 9042130-9042629 Arabidopsis thaliana
AT4G15950 1.0kb upstream 1.0kb upstream 2447 true Chr4: 9039683-9042129 Arabidopsis thaliana
AT4G15950 1.0kb upstream 1.0kb upstream 1000 false Chr4: 9039683-9040682 Arabidopsis thaliana
AT4G15950 1.0kb downstream 1.0kb downstream 2447 true Chr4: 9040683-9043129 Arabidopsis thaliana
AT4G15950 1.0kb downstream 1.0kb downstream 1000 false Chr4: 9042130-9043129 Arabidopsis thaliana
AT4G15950 2.0kb upstream 2.0kb upstream 3447 true Chr4: 9038683-9042129 Arabidopsis thaliana
AT4G15950 2.0kb upstream 2.0kb upstream 2000 false Chr4: 9038683-9040682 Arabidopsis thaliana
AT4G15950 2.0kb downstream 2.0kb downstream 3447 true Chr4: 9040683-9044129 Arabidopsis thaliana
AT4G15950 2.0kb downstream 2.0kb downstream 2000 false Chr4: 9042130-9044129 Arabidopsis thaliana
AT4G15950 5.0kb upstream 5.0kb upstream 6447 true Chr4: 9035683-9042129 Arabidopsis thaliana
AT4G15950 5.0kb upstream 5.0kb upstream 5000 false Chr4: 9035683-9040682 Arabidopsis thaliana
AT4G15950 5.0kb downstream 5.0kb downstream 6447 true Chr4: 9040683-9047129 Arabidopsis thaliana
AT4G15950 5.0kb downstream 5.0kb downstream 5000 false Chr4: 9042130-9047129 Arabidopsis thaliana
AT4G15950 10.0kb upstream 10.0kb upstream 11447 true Chr4: 9030683-9042129 Arabidopsis thaliana
AT4G15950 10.0kb upstream 10.0kb upstream 10000 false Chr4: 9030683-9040682 Arabidopsis thaliana
AT4G15950 10.0kb downstream 10.0kb downstream 11447 true Chr4: 9040683-9052129 Arabidopsis thaliana
AT4G15950 10.0kb downstream 10.0kb downstream 10000 false Chr4: 9042130-9052129 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373665 5261 Brassicaceae View MSA
123833916 5264 Brassicales-Malvales View MSA
124343792 5266 SBM View MSA
124240885 5268 Malvidae View MSA
124061465 5270 Rosid View MSA
123744062 5271 Pentapetalae View MSA
122792383 5272 Eudicot View MSA
122048092 5273 Angiosperm View MSA
123429036 5275 Viridiplantae View MSA
121349369 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.13        
cufflinks 7.943        
cufflinks 4.882       Low
cufflinks 8.53       High
cufflinks 4.656       Low
cufflinks 6.624        

0 Strain