Gene : RALFL33 A. thaliana TAIR10
Primary Identifier:  ? AT4G15800 Defline:  (1 of 3) PTHR33136//PTHR33136:SF5 - FAMILY NOT NAMED // PROTEIN RALF-LIKE 1-RELATED
Genomic Order:  1476 Name:  ? AT4G15800
Secondary Identifier:  ? PAC:19645667
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G15800 0.5kb upstream 0.5kb upstream 1048 true Chr4: 8984358-8985405 Arabidopsis thaliana
AT4G15800 0.5kb upstream 0.5kb upstream 500 false Chr4: 8984358-8984857 Arabidopsis thaliana
AT4G15800 0.5kb downstream 0.5kb downstream 1048 true Chr4: 8984858-8985905 Arabidopsis thaliana
AT4G15800 0.5kb downstream 0.5kb downstream 500 false Chr4: 8985406-8985905 Arabidopsis thaliana
AT4G15800 1.0kb upstream 1.0kb upstream 1548 true Chr4: 8983858-8985405 Arabidopsis thaliana
AT4G15800 1.0kb upstream 1.0kb upstream 1000 false Chr4: 8983858-8984857 Arabidopsis thaliana
AT4G15800 1.0kb downstream 1.0kb downstream 1548 true Chr4: 8984858-8986405 Arabidopsis thaliana
AT4G15800 1.0kb downstream 1.0kb downstream 1000 false Chr4: 8985406-8986405 Arabidopsis thaliana
AT4G15800 2.0kb upstream 2.0kb upstream 2548 true Chr4: 8982858-8985405 Arabidopsis thaliana
AT4G15800 2.0kb upstream 2.0kb upstream 2000 false Chr4: 8982858-8984857 Arabidopsis thaliana
AT4G15800 2.0kb downstream 2.0kb downstream 2548 true Chr4: 8984858-8987405 Arabidopsis thaliana
AT4G15800 2.0kb downstream 2.0kb downstream 2000 false Chr4: 8985406-8987405 Arabidopsis thaliana
AT4G15800 5.0kb upstream 5.0kb upstream 5548 true Chr4: 8979858-8985405 Arabidopsis thaliana
AT4G15800 5.0kb upstream 5.0kb upstream 5000 false Chr4: 8979858-8984857 Arabidopsis thaliana
AT4G15800 5.0kb downstream 5.0kb downstream 5548 true Chr4: 8984858-8990405 Arabidopsis thaliana
AT4G15800 5.0kb downstream 5.0kb downstream 5000 false Chr4: 8985406-8990405 Arabidopsis thaliana
AT4G15800 10.0kb upstream 10.0kb upstream 10548 true Chr4: 8974858-8985405 Arabidopsis thaliana
AT4G15800 10.0kb upstream 10.0kb upstream 10000 false Chr4: 8974858-8984857 Arabidopsis thaliana
AT4G15800 10.0kb downstream 10.0kb downstream 10548 true Chr4: 8984858-8995405 Arabidopsis thaliana
AT4G15800 10.0kb downstream 10.0kb downstream 10000 false Chr4: 8985406-8995405 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046836 5273 Angiosperm View MSA
122377333 5261 Brassicaceae View MSA
123838377 5264 Brassicales-Malvales View MSA
124351194 5266 SBM View MSA
124252019 5268 Malvidae View MSA
124072222 5270 Rosid View MSA
123751331 5271 Pentapetalae View MSA
122796895 5272 Eudicot View MSA
121350011 5274 Embryophyte View MSA
123381540 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 126.877     High High
cufflinks 68.511     High  
cufflinks 91.652     High  
cufflinks 47.013     High Low
cufflinks 59.297     High  
cufflinks 86.776     High  

0 Strain