Gene : AT4G15680 A. thaliana TAIR10

Defline:  (1 of 6) PTHR10168//PTHR10168:SF115 - GLUTAREDOXIN // MONOTHIOL GLUTAREDOXIN-S2-RELATED Genomic Order:  1459
Name:  ? AT4G15680 Secondary Identifier:  ? PAC:19646685

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana THIOREDOX-PWY Arabidopsis thaliana pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G15680 0.5kb upstream 0.5kb upstream 1144 true Chr4: 8931152-8932295 Arabidopsis thaliana
AT4G15680 0.5kb upstream 0.5kb upstream 500 false Chr4: 8931152-8931651 Arabidopsis thaliana
AT4G15680 0.5kb downstream 0.5kb downstream 1144 true Chr4: 8931652-8932795 Arabidopsis thaliana
AT4G15680 0.5kb downstream 0.5kb downstream 500 false Chr4: 8932296-8932795 Arabidopsis thaliana
AT4G15680 1.0kb upstream 1.0kb upstream 1644 true Chr4: 8930652-8932295 Arabidopsis thaliana
AT4G15680 1.0kb upstream 1.0kb upstream 1000 false Chr4: 8930652-8931651 Arabidopsis thaliana
AT4G15680 1.0kb downstream 1.0kb downstream 1644 true Chr4: 8931652-8933295 Arabidopsis thaliana
AT4G15680 1.0kb downstream 1.0kb downstream 1000 false Chr4: 8932296-8933295 Arabidopsis thaliana
AT4G15680 2.0kb upstream 2.0kb upstream 2644 true Chr4: 8929652-8932295 Arabidopsis thaliana
AT4G15680 2.0kb upstream 2.0kb upstream 2000 false Chr4: 8929652-8931651 Arabidopsis thaliana
AT4G15680 2.0kb downstream 2.0kb downstream 2644 true Chr4: 8931652-8934295 Arabidopsis thaliana
AT4G15680 2.0kb downstream 2.0kb downstream 2000 false Chr4: 8932296-8934295 Arabidopsis thaliana
AT4G15680 5.0kb upstream 5.0kb upstream 5644 true Chr4: 8926652-8932295 Arabidopsis thaliana
AT4G15680 5.0kb upstream 5.0kb upstream 5000 false Chr4: 8926652-8931651 Arabidopsis thaliana
AT4G15680 5.0kb downstream 5.0kb downstream 5644 true Chr4: 8931652-8937295 Arabidopsis thaliana
AT4G15680 5.0kb downstream 5.0kb downstream 5000 false Chr4: 8932296-8937295 Arabidopsis thaliana
AT4G15680 10.0kb upstream 10.0kb upstream 10644 true Chr4: 8921652-8932295 Arabidopsis thaliana
AT4G15680 10.0kb upstream 10.0kb upstream 10000 false Chr4: 8921652-8931651 Arabidopsis thaliana
AT4G15680 10.0kb downstream 10.0kb downstream 10644 true Chr4: 8931652-8942295 Arabidopsis thaliana
AT4G15680 10.0kb downstream 10.0kb downstream 10000 false Chr4: 8932296-8942295 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380228 5261 Brassicaceae View MSA
123802610 5264 Brassicales-Malvales View MSA
124299792 5266 SBM View MSA
124151116 5268 Malvidae View MSA
124065787 5270 Rosid View MSA
123750086 5271 Pentapetalae View MSA
122796200 5272 Eudicot View MSA
122047042 5273 Angiosperm View MSA
121349593 5274 Embryophyte View MSA
123381368 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.144        
cufflinks 4.45        
cufflinks 0.152     Low  
cufflinks 0.893        
cufflinks 0.017     Low Low
cufflinks 1.911        

0 Strain