Gene : TCP2 A. thaliana TAIR10
Primary Identifier:  ? AT4G18390 Defline:  (1 of 2) PTHR31072:SF2 - TRANSCRIPTION FACTOR TCP2-RELATED
Genomic Order:  1777 Name:  ? AT4G18390
Secondary Identifier:  ? PAC:19644544
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G18390 0.5kb upstream 0.5kb upstream 3110 true Chr4: 10162953-10166062 Arabidopsis thaliana
AT4G18390 0.5kb upstream 0.5kb upstream 500 false Chr4: 10165563-10166062 Arabidopsis thaliana
AT4G18390 0.5kb downstream 0.5kb downstream 3110 true Chr4: 10162453-10165562 Arabidopsis thaliana
AT4G18390 0.5kb downstream 0.5kb downstream 500 false Chr4: 10162453-10162952 Arabidopsis thaliana
AT4G18390 1.0kb upstream 1.0kb upstream 3610 true Chr4: 10162953-10166562 Arabidopsis thaliana
AT4G18390 1.0kb upstream 1.0kb upstream 1000 false Chr4: 10165563-10166562 Arabidopsis thaliana
AT4G18390 1.0kb downstream 1.0kb downstream 3610 true Chr4: 10161953-10165562 Arabidopsis thaliana
AT4G18390 1.0kb downstream 1.0kb downstream 1000 false Chr4: 10161953-10162952 Arabidopsis thaliana
AT4G18390 2.0kb upstream 2.0kb upstream 4610 true Chr4: 10162953-10167562 Arabidopsis thaliana
AT4G18390 2.0kb upstream 2.0kb upstream 2000 false Chr4: 10165563-10167562 Arabidopsis thaliana
AT4G18390 2.0kb downstream 2.0kb downstream 4610 true Chr4: 10160953-10165562 Arabidopsis thaliana
AT4G18390 2.0kb downstream 2.0kb downstream 2000 false Chr4: 10160953-10162952 Arabidopsis thaliana
AT4G18390 5.0kb upstream 5.0kb upstream 7610 true Chr4: 10162953-10170562 Arabidopsis thaliana
AT4G18390 5.0kb upstream 5.0kb upstream 5000 false Chr4: 10165563-10170562 Arabidopsis thaliana
AT4G18390 5.0kb downstream 5.0kb downstream 7610 true Chr4: 10157953-10165562 Arabidopsis thaliana
AT4G18390 5.0kb downstream 5.0kb downstream 5000 false Chr4: 10157953-10162952 Arabidopsis thaliana
AT4G18390 10.0kb upstream 10.0kb upstream 12610 true Chr4: 10162953-10175562 Arabidopsis thaliana
AT4G18390 10.0kb upstream 10.0kb upstream 10000 false Chr4: 10165563-10175562 Arabidopsis thaliana
AT4G18390 10.0kb downstream 10.0kb downstream 12610 true Chr4: 10152953-10165562 Arabidopsis thaliana
AT4G18390 10.0kb downstream 10.0kb downstream 10000 false Chr4: 10152953-10162952 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363644 5261 Brassicaceae View MSA
123838255 5264 Brassicales-Malvales View MSA
124341789 5266 SBM View MSA
124243741 5268 Malvidae View MSA
124069412 5270 Rosid View MSA
123743584 5271 Pentapetalae View MSA
122787368 5272 Eudicot View MSA
122042527 5273 Angiosperm View MSA
121350950 5274 Embryophyte View MSA
123381946 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.585        
cufflinks 4.918        
cufflinks 10.535       High
cufflinks 5.472        
cufflinks 9.58       High
cufflinks 4.953        

0 Strain