Gene : AT4G18425 A. thaliana TAIR10
Defline:  (1 of 3) PTHR31621//PTHR31621:SF0 - FAMILY NOT NAMED // DUF679 DOMAIN MEMBRANE PROTEIN 7 Genomic Order:  1781
Name:  ? AT4G18425 Secondary Identifier:  ? PAC:19646100
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G18425 0.5kb upstream 0.5kb upstream 1307 true Chr4: 10181334-10182640 Arabidopsis thaliana
AT4G18425 0.5kb upstream 0.5kb upstream 500 false Chr4: 10182141-10182640 Arabidopsis thaliana
AT4G18425 0.5kb downstream 0.5kb downstream 1307 true Chr4: 10180834-10182140 Arabidopsis thaliana
AT4G18425 0.5kb downstream 0.5kb downstream 500 false Chr4: 10180834-10181333 Arabidopsis thaliana
AT4G18425 1.0kb upstream 1.0kb upstream 1807 true Chr4: 10181334-10183140 Arabidopsis thaliana
AT4G18425 1.0kb upstream 1.0kb upstream 1000 false Chr4: 10182141-10183140 Arabidopsis thaliana
AT4G18425 1.0kb downstream 1.0kb downstream 1807 true Chr4: 10180334-10182140 Arabidopsis thaliana
AT4G18425 1.0kb downstream 1.0kb downstream 1000 false Chr4: 10180334-10181333 Arabidopsis thaliana
AT4G18425 2.0kb upstream 2.0kb upstream 2807 true Chr4: 10181334-10184140 Arabidopsis thaliana
AT4G18425 2.0kb upstream 2.0kb upstream 2000 false Chr4: 10182141-10184140 Arabidopsis thaliana
AT4G18425 2.0kb downstream 2.0kb downstream 2807 true Chr4: 10179334-10182140 Arabidopsis thaliana
AT4G18425 2.0kb downstream 2.0kb downstream 2000 false Chr4: 10179334-10181333 Arabidopsis thaliana
AT4G18425 5.0kb upstream 5.0kb upstream 5807 true Chr4: 10181334-10187140 Arabidopsis thaliana
AT4G18425 5.0kb upstream 5.0kb upstream 5000 false Chr4: 10182141-10187140 Arabidopsis thaliana
AT4G18425 5.0kb downstream 5.0kb downstream 5807 true Chr4: 10176334-10182140 Arabidopsis thaliana
AT4G18425 5.0kb downstream 5.0kb downstream 5000 false Chr4: 10176334-10181333 Arabidopsis thaliana
AT4G18425 10.0kb upstream 10.0kb upstream 10807 true Chr4: 10181334-10192140 Arabidopsis thaliana
AT4G18425 10.0kb upstream 10.0kb upstream 10000 false Chr4: 10182141-10192140 Arabidopsis thaliana
AT4G18425 10.0kb downstream 10.0kb downstream 10807 true Chr4: 10171334-10182140 Arabidopsis thaliana
AT4G18425 10.0kb downstream 10.0kb downstream 10000 false Chr4: 10171334-10181333 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369724 5261 Brassicaceae View MSA
123831555 5264 Brassicales-Malvales View MSA
124346607 5266 SBM View MSA
124250735 5268 Malvidae View MSA
124071441 5270 Rosid View MSA
123744074 5271 Pentapetalae View MSA
122789461 5272 Eudicot View MSA
122044570 5273 Angiosperm View MSA
121349168 5274 Embryophyte View MSA
123426818 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.214        
cufflinks 3.817        
cufflinks 1.148       Low
cufflinks 7.752       High
cufflinks 1.268       Low
cufflinks 9.204       High

0 Strain