Gene : DEG5 A. thaliana TAIR10
Primary Identifier:  ? AT4G18370 Defline:  (1 of 1) PTHR22939//PTHR22939:SF76 - SERINE PROTEASE FAMILY S1C HTRA-RELATED // PROTEASE DO-LIKE 5, CHLOROPLASTIC
Genomic Order:  1773 Name:  ? AT4G18370
Secondary Identifier:  ? PAC:19646992
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G18370 0.5kb upstream 0.5kb upstream 2590 true Chr4: 10148629-10151218 Arabidopsis thaliana
AT4G18370 0.5kb upstream 0.5kb upstream 500 false Chr4: 10148629-10149128 Arabidopsis thaliana
AT4G18370 0.5kb downstream 0.5kb downstream 2590 true Chr4: 10149129-10151718 Arabidopsis thaliana
AT4G18370 0.5kb downstream 0.5kb downstream 500 false Chr4: 10151219-10151718 Arabidopsis thaliana
AT4G18370 1.0kb upstream 1.0kb upstream 3090 true Chr4: 10148129-10151218 Arabidopsis thaliana
AT4G18370 1.0kb upstream 1.0kb upstream 1000 false Chr4: 10148129-10149128 Arabidopsis thaliana
AT4G18370 1.0kb downstream 1.0kb downstream 3090 true Chr4: 10149129-10152218 Arabidopsis thaliana
AT4G18370 1.0kb downstream 1.0kb downstream 1000 false Chr4: 10151219-10152218 Arabidopsis thaliana
AT4G18370 2.0kb upstream 2.0kb upstream 4090 true Chr4: 10147129-10151218 Arabidopsis thaliana
AT4G18370 2.0kb upstream 2.0kb upstream 2000 false Chr4: 10147129-10149128 Arabidopsis thaliana
AT4G18370 2.0kb downstream 2.0kb downstream 4090 true Chr4: 10149129-10153218 Arabidopsis thaliana
AT4G18370 2.0kb downstream 2.0kb downstream 2000 false Chr4: 10151219-10153218 Arabidopsis thaliana
AT4G18370 5.0kb upstream 5.0kb upstream 7090 true Chr4: 10144129-10151218 Arabidopsis thaliana
AT4G18370 5.0kb upstream 5.0kb upstream 5000 false Chr4: 10144129-10149128 Arabidopsis thaliana
AT4G18370 5.0kb downstream 5.0kb downstream 7090 true Chr4: 10149129-10156218 Arabidopsis thaliana
AT4G18370 5.0kb downstream 5.0kb downstream 5000 false Chr4: 10151219-10156218 Arabidopsis thaliana
AT4G18370 10.0kb upstream 10.0kb upstream 12090 true Chr4: 10139129-10151218 Arabidopsis thaliana
AT4G18370 10.0kb upstream 10.0kb upstream 10000 false Chr4: 10139129-10149128 Arabidopsis thaliana
AT4G18370 10.0kb downstream 10.0kb downstream 12090 true Chr4: 10149129-10161218 Arabidopsis thaliana
AT4G18370 10.0kb downstream 10.0kb downstream 10000 false Chr4: 10151219-10161218 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372529 5261 Brassicaceae View MSA
123831551 5264 Brassicales-Malvales View MSA
124346322 5266 SBM View MSA
124238394 5268 Malvidae View MSA
124050488 5270 Rosid View MSA
123749873 5271 Pentapetalae View MSA
122788077 5272 Eudicot View MSA
122044835 5273 Angiosperm View MSA
121347205 5274 Embryophyte View MSA
123425899 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.303     High  
cufflinks 3.797        
cufflinks 33.891     High High
cufflinks 3.856        
cufflinks 24.83        
cufflinks 2.374       Low

0 Strain