Gene : AT4G18060 A. thaliana TAIR10
Defline:  (1 of 1) KOG4429 - Uncharacterized conserved protein, contains SH3 and FCH domains Genomic Order:  1738
Name:  ? AT4G18060 Secondary Identifier:  ? PAC:19644168
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G18060 0.5kb upstream 0.5kb upstream 2920 true Chr4: 10027480-10030399 Arabidopsis thaliana
AT4G18060 0.5kb upstream 0.5kb upstream 500 false Chr4: 10029900-10030399 Arabidopsis thaliana
AT4G18060 0.5kb downstream 0.5kb downstream 2920 true Chr4: 10026980-10029899 Arabidopsis thaliana
AT4G18060 0.5kb downstream 0.5kb downstream 500 false Chr4: 10026980-10027479 Arabidopsis thaliana
AT4G18060 1.0kb upstream 1.0kb upstream 3420 true Chr4: 10027480-10030899 Arabidopsis thaliana
AT4G18060 1.0kb upstream 1.0kb upstream 1000 false Chr4: 10029900-10030899 Arabidopsis thaliana
AT4G18060 1.0kb downstream 1.0kb downstream 3420 true Chr4: 10026480-10029899 Arabidopsis thaliana
AT4G18060 1.0kb downstream 1.0kb downstream 1000 false Chr4: 10026480-10027479 Arabidopsis thaliana
AT4G18060 2.0kb upstream 2.0kb upstream 4420 true Chr4: 10027480-10031899 Arabidopsis thaliana
AT4G18060 2.0kb upstream 2.0kb upstream 2000 false Chr4: 10029900-10031899 Arabidopsis thaliana
AT4G18060 2.0kb downstream 2.0kb downstream 4420 true Chr4: 10025480-10029899 Arabidopsis thaliana
AT4G18060 2.0kb downstream 2.0kb downstream 2000 false Chr4: 10025480-10027479 Arabidopsis thaliana
AT4G18060 5.0kb upstream 5.0kb upstream 7420 true Chr4: 10027480-10034899 Arabidopsis thaliana
AT4G18060 5.0kb upstream 5.0kb upstream 5000 false Chr4: 10029900-10034899 Arabidopsis thaliana
AT4G18060 5.0kb downstream 5.0kb downstream 7420 true Chr4: 10022480-10029899 Arabidopsis thaliana
AT4G18060 5.0kb downstream 5.0kb downstream 5000 false Chr4: 10022480-10027479 Arabidopsis thaliana
AT4G18060 10.0kb upstream 10.0kb upstream 12420 true Chr4: 10027480-10039899 Arabidopsis thaliana
AT4G18060 10.0kb upstream 10.0kb upstream 10000 false Chr4: 10029900-10039899 Arabidopsis thaliana
AT4G18060 10.0kb downstream 10.0kb downstream 12420 true Chr4: 10017480-10029899 Arabidopsis thaliana
AT4G18060 10.0kb downstream 10.0kb downstream 10000 false Chr4: 10017480-10027479 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366644 5261 Brassicaceae View MSA
123833829 5264 Brassicales-Malvales View MSA
124321902 5266 SBM View MSA
124239653 5268 Malvidae View MSA
124060969 5270 Rosid View MSA
123745514 5271 Pentapetalae View MSA
122793462 5272 Eudicot View MSA
122043721 5273 Angiosperm View MSA
121310176 5274 Embryophyte View MSA
123347741 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.36        
cufflinks 20.079        
cufflinks 14.005       Low
cufflinks 19.04        
cufflinks 13.605       Low
cufflinks 22.93       High

0 Strain