Gene : AGD8 A. thaliana TAIR10
Primary Identifier:  ? AT4G17890 Defline:  (1 of 3) K12493 - ADP-ribosylation factor GTPase-activating protein 2/3 (ARFGAP2_3)
Genomic Order:  1718 Name:  ? AT4G17890
Secondary Identifier:  ? PAC:19644312
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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G17890 0.5kb upstream 0.5kb upstream 2972 true Chr4: 9936522-9939493 Arabidopsis thaliana
AT4G17890 0.5kb upstream 0.5kb upstream 500 false Chr4: 9936522-9937021 Arabidopsis thaliana
AT4G17890 0.5kb downstream 0.5kb downstream 2972 true Chr4: 9937022-9939993 Arabidopsis thaliana
AT4G17890 0.5kb downstream 0.5kb downstream 500 false Chr4: 9939494-9939993 Arabidopsis thaliana
AT4G17890 1.0kb upstream 1.0kb upstream 3472 true Chr4: 9936022-9939493 Arabidopsis thaliana
AT4G17890 1.0kb upstream 1.0kb upstream 1000 false Chr4: 9936022-9937021 Arabidopsis thaliana
AT4G17890 1.0kb downstream 1.0kb downstream 3472 true Chr4: 9937022-9940493 Arabidopsis thaliana
AT4G17890 1.0kb downstream 1.0kb downstream 1000 false Chr4: 9939494-9940493 Arabidopsis thaliana
AT4G17890 2.0kb upstream 2.0kb upstream 4472 true Chr4: 9935022-9939493 Arabidopsis thaliana
AT4G17890 2.0kb upstream 2.0kb upstream 2000 false Chr4: 9935022-9937021 Arabidopsis thaliana
AT4G17890 2.0kb downstream 2.0kb downstream 4472 true Chr4: 9937022-9941493 Arabidopsis thaliana
AT4G17890 2.0kb downstream 2.0kb downstream 2000 false Chr4: 9939494-9941493 Arabidopsis thaliana
AT4G17890 5.0kb upstream 5.0kb upstream 7472 true Chr4: 9932022-9939493 Arabidopsis thaliana
AT4G17890 5.0kb upstream 5.0kb upstream 5000 false Chr4: 9932022-9937021 Arabidopsis thaliana
AT4G17890 5.0kb downstream 5.0kb downstream 7472 true Chr4: 9937022-9944493 Arabidopsis thaliana
AT4G17890 5.0kb downstream 5.0kb downstream 5000 false Chr4: 9939494-9944493 Arabidopsis thaliana
AT4G17890 10.0kb upstream 10.0kb upstream 12472 true Chr4: 9927022-9939493 Arabidopsis thaliana
AT4G17890 10.0kb upstream 10.0kb upstream 10000 false Chr4: 9927022-9937021 Arabidopsis thaliana
AT4G17890 10.0kb downstream 10.0kb downstream 12472 true Chr4: 9937022-9949493 Arabidopsis thaliana
AT4G17890 10.0kb downstream 10.0kb downstream 10000 false Chr4: 9939494-9949493 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026503 5273 Angiosperm View MSA
122369314 5261 Brassicaceae View MSA
123838332 5264 Brassicales-Malvales View MSA
124337756 5266 SBM View MSA
124239014 5268 Malvidae View MSA
124068773 5270 Rosid View MSA
123737800 5271 Pentapetalae View MSA
122787189 5272 Eudicot View MSA
121347869 5274 Embryophyte View MSA
123428144 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.949        
cufflinks 12.904        
cufflinks 6.551       Low
cufflinks 13.426        
cufflinks 6.452       Low
cufflinks 14.431       High

0 Strain