Gene : AT4G17920 A. thaliana TAIR10
Defline:  (1 of 130) PTHR14155 - RING FINGER DOMAIN-CONTAINING Genomic Order:  1723
Name:  ? AT4G17920 Secondary Identifier:  ? PAC:19644310
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G17920 0.5kb upstream 0.5kb upstream 1370 true Chr4: 9963221-9964590 Arabidopsis thaliana
AT4G17920 0.5kb upstream 0.5kb upstream 500 false Chr4: 9964091-9964590 Arabidopsis thaliana
AT4G17920 0.5kb downstream 0.5kb downstream 1370 true Chr4: 9962721-9964090 Arabidopsis thaliana
AT4G17920 0.5kb downstream 0.5kb downstream 500 false Chr4: 9962721-9963220 Arabidopsis thaliana
AT4G17920 1.0kb upstream 1.0kb upstream 1870 true Chr4: 9963221-9965090 Arabidopsis thaliana
AT4G17920 1.0kb upstream 1.0kb upstream 1000 false Chr4: 9964091-9965090 Arabidopsis thaliana
AT4G17920 1.0kb downstream 1.0kb downstream 1870 true Chr4: 9962221-9964090 Arabidopsis thaliana
AT4G17920 1.0kb downstream 1.0kb downstream 1000 false Chr4: 9962221-9963220 Arabidopsis thaliana
AT4G17920 2.0kb upstream 2.0kb upstream 2870 true Chr4: 9963221-9966090 Arabidopsis thaliana
AT4G17920 2.0kb upstream 2.0kb upstream 2000 false Chr4: 9964091-9966090 Arabidopsis thaliana
AT4G17920 2.0kb downstream 2.0kb downstream 2870 true Chr4: 9961221-9964090 Arabidopsis thaliana
AT4G17920 2.0kb downstream 2.0kb downstream 2000 false Chr4: 9961221-9963220 Arabidopsis thaliana
AT4G17920 5.0kb upstream 5.0kb upstream 5870 true Chr4: 9963221-9969090 Arabidopsis thaliana
AT4G17920 5.0kb upstream 5.0kb upstream 5000 false Chr4: 9964091-9969090 Arabidopsis thaliana
AT4G17920 5.0kb downstream 5.0kb downstream 5870 true Chr4: 9958221-9964090 Arabidopsis thaliana
AT4G17920 5.0kb downstream 5.0kb downstream 5000 false Chr4: 9958221-9963220 Arabidopsis thaliana
AT4G17920 10.0kb upstream 10.0kb upstream 10870 true Chr4: 9963221-9974090 Arabidopsis thaliana
AT4G17920 10.0kb upstream 10.0kb upstream 10000 false Chr4: 9964091-9974090 Arabidopsis thaliana
AT4G17920 10.0kb downstream 10.0kb downstream 10870 true Chr4: 9953221-9964090 Arabidopsis thaliana
AT4G17920 10.0kb downstream 10.0kb downstream 10000 false Chr4: 9953221-9963220 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376148 5261 Brassicaceae View MSA
123836086 5264 Brassicales-Malvales View MSA
124341281 5266 SBM View MSA
124244919 5268 Malvidae View MSA
124050412 5270 Rosid View MSA
123751014 5271 Pentapetalae View MSA
122788959 5272 Eudicot View MSA
122044567 5273 Angiosperm View MSA
121310312 5274 Embryophyte View MSA
123347829 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.153     Low  
cufflinks 0.139     Low  
cufflinks 0.194     Low  
cufflinks 0.09     Low  
cufflinks 0.28       High
cufflinks 0.055     Low Low

0 Strain