Gene : NAC071 A. thaliana TAIR10
Primary Identifier:  ? AT4G17980 Defline:  (1 of 3) PTHR31989//PTHR31989:SF51 - FAMILY NOT NAMED // F5D14.30 PROTEIN-RELATED
Genomic Order:  1729 Name:  ? AT4G17980
Secondary Identifier:  ? PAC:19644057
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G17980 0.5kb upstream 0.5kb upstream 1689 true Chr4: 9978850-9980538 Arabidopsis thaliana
AT4G17980 0.5kb upstream 0.5kb upstream 500 false Chr4: 9980039-9980538 Arabidopsis thaliana
AT4G17980 0.5kb downstream 0.5kb downstream 1689 true Chr4: 9978350-9980038 Arabidopsis thaliana
AT4G17980 0.5kb downstream 0.5kb downstream 500 false Chr4: 9978350-9978849 Arabidopsis thaliana
AT4G17980 1.0kb upstream 1.0kb upstream 2189 true Chr4: 9978850-9981038 Arabidopsis thaliana
AT4G17980 1.0kb upstream 1.0kb upstream 1000 false Chr4: 9980039-9981038 Arabidopsis thaliana
AT4G17980 1.0kb downstream 1.0kb downstream 2189 true Chr4: 9977850-9980038 Arabidopsis thaliana
AT4G17980 1.0kb downstream 1.0kb downstream 1000 false Chr4: 9977850-9978849 Arabidopsis thaliana
AT4G17980 2.0kb upstream 2.0kb upstream 3189 true Chr4: 9978850-9982038 Arabidopsis thaliana
AT4G17980 2.0kb upstream 2.0kb upstream 2000 false Chr4: 9980039-9982038 Arabidopsis thaliana
AT4G17980 2.0kb downstream 2.0kb downstream 3189 true Chr4: 9976850-9980038 Arabidopsis thaliana
AT4G17980 2.0kb downstream 2.0kb downstream 2000 false Chr4: 9976850-9978849 Arabidopsis thaliana
AT4G17980 5.0kb upstream 5.0kb upstream 6189 true Chr4: 9978850-9985038 Arabidopsis thaliana
AT4G17980 5.0kb upstream 5.0kb upstream 5000 false Chr4: 9980039-9985038 Arabidopsis thaliana
AT4G17980 5.0kb downstream 5.0kb downstream 6189 true Chr4: 9973850-9980038 Arabidopsis thaliana
AT4G17980 5.0kb downstream 5.0kb downstream 5000 false Chr4: 9973850-9978849 Arabidopsis thaliana
AT4G17980 10.0kb upstream 10.0kb upstream 11189 true Chr4: 9978850-9990038 Arabidopsis thaliana
AT4G17980 10.0kb upstream 10.0kb upstream 10000 false Chr4: 9980039-9990038 Arabidopsis thaliana
AT4G17980 10.0kb downstream 10.0kb downstream 11189 true Chr4: 9968850-9980038 Arabidopsis thaliana
AT4G17980 10.0kb downstream 10.0kb downstream 10000 false Chr4: 9968850-9978849 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377885 5261 Brassicaceae View MSA
123837975 5264 Brassicales-Malvales View MSA
124336798 5266 SBM View MSA
124253280 5268 Malvidae View MSA
124063603 5270 Rosid View MSA
123753355 5271 Pentapetalae View MSA
122797864 5272 Eudicot View MSA
122051475 5273 Angiosperm View MSA
121312510 5274 Embryophyte View MSA
123349677 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.012     Low Low
cufflinks 0.613        
cufflinks 0.042     Low  
cufflinks 0.66        
cufflinks 0.036     Low  
cufflinks 0.857        

0 Strain