Gene : AT4G17740 A. thaliana TAIR10
Defline:  (1 of 5) 3.4.21.102 - C-terminal processing peptidase / Tsp protease Genomic Order:  1703
Name:  ? AT4G17740 Secondary Identifier:  ? PAC:19647144
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G17740 0.5kb upstream 0.5kb upstream 3276 true Chr4: 9866977-9870252 Arabidopsis thaliana
AT4G17740 0.5kb upstream 0.5kb upstream 500 false Chr4: 9869753-9870252 Arabidopsis thaliana
AT4G17740 0.5kb downstream 0.5kb downstream 3276 true Chr4: 9866477-9869752 Arabidopsis thaliana
AT4G17740 0.5kb downstream 0.5kb downstream 500 false Chr4: 9866477-9866976 Arabidopsis thaliana
AT4G17740 1.0kb upstream 1.0kb upstream 3776 true Chr4: 9866977-9870752 Arabidopsis thaliana
AT4G17740 1.0kb upstream 1.0kb upstream 1000 false Chr4: 9869753-9870752 Arabidopsis thaliana
AT4G17740 1.0kb downstream 1.0kb downstream 3776 true Chr4: 9865977-9869752 Arabidopsis thaliana
AT4G17740 1.0kb downstream 1.0kb downstream 1000 false Chr4: 9865977-9866976 Arabidopsis thaliana
AT4G17740 2.0kb upstream 2.0kb upstream 4776 true Chr4: 9866977-9871752 Arabidopsis thaliana
AT4G17740 2.0kb upstream 2.0kb upstream 2000 false Chr4: 9869753-9871752 Arabidopsis thaliana
AT4G17740 2.0kb downstream 2.0kb downstream 4776 true Chr4: 9864977-9869752 Arabidopsis thaliana
AT4G17740 2.0kb downstream 2.0kb downstream 2000 false Chr4: 9864977-9866976 Arabidopsis thaliana
AT4G17740 5.0kb upstream 5.0kb upstream 7776 true Chr4: 9866977-9874752 Arabidopsis thaliana
AT4G17740 5.0kb upstream 5.0kb upstream 5000 false Chr4: 9869753-9874752 Arabidopsis thaliana
AT4G17740 5.0kb downstream 5.0kb downstream 7776 true Chr4: 9861977-9869752 Arabidopsis thaliana
AT4G17740 5.0kb downstream 5.0kb downstream 5000 false Chr4: 9861977-9866976 Arabidopsis thaliana
AT4G17740 10.0kb upstream 10.0kb upstream 12776 true Chr4: 9866977-9879752 Arabidopsis thaliana
AT4G17740 10.0kb upstream 10.0kb upstream 10000 false Chr4: 9869753-9879752 Arabidopsis thaliana
AT4G17740 10.0kb downstream 10.0kb downstream 12776 true Chr4: 9856977-9869752 Arabidopsis thaliana
AT4G17740 10.0kb downstream 10.0kb downstream 10000 false Chr4: 9856977-9866976 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361066 5261 Brassicaceae View MSA
123834760 5264 Brassicales-Malvales View MSA
124339996 5266 SBM View MSA
124238609 5268 Malvidae View MSA
124060968 5270 Rosid View MSA
123750616 5271 Pentapetalae View MSA
122792134 5272 Eudicot View MSA
122042962 5273 Angiosperm View MSA
121346288 5274 Embryophyte View MSA
123424698 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.173        
cufflinks 1.515        
cufflinks 8.631        
cufflinks 1.852        
cufflinks 8.353        
cufflinks 1.47       Low

0 Strain