Gene : AT4G17830 A. thaliana TAIR10
Defline:  (1 of 1) 3.5.1.16 - Acetylornithine deacetylase / N-acetylornithinase Genomic Order:  1712
Name:  ? AT4G17830 Secondary Identifier:  ? PAC:19646932
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana ARGSYN-PWY Arabidopsis thaliana pathologic  
Athaliana GLUTORN-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G17830 0.5kb upstream 0.5kb upstream 2931 true Chr4: 9915313-9918243 Arabidopsis thaliana
AT4G17830 0.5kb upstream 0.5kb upstream 500 false Chr4: 9915313-9915812 Arabidopsis thaliana
AT4G17830 0.5kb downstream 0.5kb downstream 2931 true Chr4: 9915813-9918743 Arabidopsis thaliana
AT4G17830 0.5kb downstream 0.5kb downstream 500 false Chr4: 9918244-9918743 Arabidopsis thaliana
AT4G17830 1.0kb upstream 1.0kb upstream 3431 true Chr4: 9914813-9918243 Arabidopsis thaliana
AT4G17830 1.0kb upstream 1.0kb upstream 1000 false Chr4: 9914813-9915812 Arabidopsis thaliana
AT4G17830 1.0kb downstream 1.0kb downstream 3431 true Chr4: 9915813-9919243 Arabidopsis thaliana
AT4G17830 1.0kb downstream 1.0kb downstream 1000 false Chr4: 9918244-9919243 Arabidopsis thaliana
AT4G17830 2.0kb upstream 2.0kb upstream 4431 true Chr4: 9913813-9918243 Arabidopsis thaliana
AT4G17830 2.0kb upstream 2.0kb upstream 2000 false Chr4: 9913813-9915812 Arabidopsis thaliana
AT4G17830 2.0kb downstream 2.0kb downstream 4431 true Chr4: 9915813-9920243 Arabidopsis thaliana
AT4G17830 2.0kb downstream 2.0kb downstream 2000 false Chr4: 9918244-9920243 Arabidopsis thaliana
AT4G17830 5.0kb upstream 5.0kb upstream 7431 true Chr4: 9910813-9918243 Arabidopsis thaliana
AT4G17830 5.0kb upstream 5.0kb upstream 5000 false Chr4: 9910813-9915812 Arabidopsis thaliana
AT4G17830 5.0kb downstream 5.0kb downstream 7431 true Chr4: 9915813-9923243 Arabidopsis thaliana
AT4G17830 5.0kb downstream 5.0kb downstream 5000 false Chr4: 9918244-9923243 Arabidopsis thaliana
AT4G17830 10.0kb upstream 10.0kb upstream 12431 true Chr4: 9905813-9918243 Arabidopsis thaliana
AT4G17830 10.0kb upstream 10.0kb upstream 10000 false Chr4: 9905813-9915812 Arabidopsis thaliana
AT4G17830 10.0kb downstream 10.0kb downstream 12431 true Chr4: 9915813-9928243 Arabidopsis thaliana
AT4G17830 10.0kb downstream 10.0kb downstream 10000 false Chr4: 9918244-9928243 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375657 5261 Brassicaceae View MSA
123831336 5264 Brassicales-Malvales View MSA
124343627 5266 SBM View MSA
124240366 5268 Malvidae View MSA
124065214 5270 Rosid View MSA
123738237 5271 Pentapetalae View MSA
122790334 5272 Eudicot View MSA
122044666 5273 Angiosperm View MSA
121348165 5274 Embryophyte View MSA
123425283 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.331       High
cufflinks 9.284       Low
cufflinks 10.405        
cufflinks 11.361        
cufflinks 12.879        
cufflinks 9.941        

0 Strain