Gene : ERF-1 A. thaliana TAIR10
Primary Identifier:  ? AT4G17500 Defline:  (1 of 1) PTHR31190//PTHR31190:SF30 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 15-RELATED
Genomic Order:  1672 Name:  ? AT4G17500
Secondary Identifier:  ? PAC:19644146
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G17500 0.5kb upstream 0.5kb upstream 1516 true Chr4: 9758825-9760340 Arabidopsis thaliana
AT4G17500 0.5kb upstream 0.5kb upstream 500 false Chr4: 9758825-9759324 Arabidopsis thaliana
AT4G17500 0.5kb downstream 0.5kb downstream 1516 true Chr4: 9759325-9760840 Arabidopsis thaliana
AT4G17500 0.5kb downstream 0.5kb downstream 500 false Chr4: 9760341-9760840 Arabidopsis thaliana
AT4G17500 1.0kb upstream 1.0kb upstream 2016 true Chr4: 9758325-9760340 Arabidopsis thaliana
AT4G17500 1.0kb upstream 1.0kb upstream 1000 false Chr4: 9758325-9759324 Arabidopsis thaliana
AT4G17500 1.0kb downstream 1.0kb downstream 2016 true Chr4: 9759325-9761340 Arabidopsis thaliana
AT4G17500 1.0kb downstream 1.0kb downstream 1000 false Chr4: 9760341-9761340 Arabidopsis thaliana
AT4G17500 2.0kb upstream 2.0kb upstream 3016 true Chr4: 9757325-9760340 Arabidopsis thaliana
AT4G17500 2.0kb upstream 2.0kb upstream 2000 false Chr4: 9757325-9759324 Arabidopsis thaliana
AT4G17500 2.0kb downstream 2.0kb downstream 3016 true Chr4: 9759325-9762340 Arabidopsis thaliana
AT4G17500 2.0kb downstream 2.0kb downstream 2000 false Chr4: 9760341-9762340 Arabidopsis thaliana
AT4G17500 5.0kb upstream 5.0kb upstream 6016 true Chr4: 9754325-9760340 Arabidopsis thaliana
AT4G17500 5.0kb upstream 5.0kb upstream 5000 false Chr4: 9754325-9759324 Arabidopsis thaliana
AT4G17500 5.0kb downstream 5.0kb downstream 6016 true Chr4: 9759325-9765340 Arabidopsis thaliana
AT4G17500 5.0kb downstream 5.0kb downstream 5000 false Chr4: 9760341-9765340 Arabidopsis thaliana
AT4G17500 10.0kb upstream 10.0kb upstream 11016 true Chr4: 9749325-9760340 Arabidopsis thaliana
AT4G17500 10.0kb upstream 10.0kb upstream 10000 false Chr4: 9749325-9759324 Arabidopsis thaliana
AT4G17500 10.0kb downstream 10.0kb downstream 11016 true Chr4: 9759325-9770340 Arabidopsis thaliana
AT4G17500 10.0kb downstream 10.0kb downstream 10000 false Chr4: 9760341-9770340 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376140 5261 Brassicaceae View MSA
123839019 5264 Brassicales-Malvales View MSA
124340684 5266 SBM View MSA
124242328 5268 Malvidae View MSA
124072415 5270 Rosid View MSA
123749179 5271 Pentapetalae View MSA
122791440 5272 Eudicot View MSA
122050930 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.888       Low
cufflinks 197.963     High  
cufflinks 129.983     High  
cufflinks 195.437     High  
cufflinks 90.033     High  
cufflinks 118.148     High  

0 Strain