Gene : AT4G17520 A. thaliana TAIR10
Defline:  (1 of 3) K13199 - plasminogen activator inhibitor 1 RNA-binding protein (SERBP1) Genomic Order:  1675
Name:  ? AT4G17520 Secondary Identifier:  ? PAC:19644678
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G17520 0.5kb upstream 0.5kb upstream 2796 true Chr4: 9770797-9773592 Arabidopsis thaliana
AT4G17520 0.5kb upstream 0.5kb upstream 500 false Chr4: 9770797-9771296 Arabidopsis thaliana
AT4G17520 0.5kb downstream 0.5kb downstream 2796 true Chr4: 9771297-9774092 Arabidopsis thaliana
AT4G17520 0.5kb downstream 0.5kb downstream 500 false Chr4: 9773593-9774092 Arabidopsis thaliana
AT4G17520 1.0kb upstream 1.0kb upstream 3296 true Chr4: 9770297-9773592 Arabidopsis thaliana
AT4G17520 1.0kb upstream 1.0kb upstream 1000 false Chr4: 9770297-9771296 Arabidopsis thaliana
AT4G17520 1.0kb downstream 1.0kb downstream 3296 true Chr4: 9771297-9774592 Arabidopsis thaliana
AT4G17520 1.0kb downstream 1.0kb downstream 1000 false Chr4: 9773593-9774592 Arabidopsis thaliana
AT4G17520 2.0kb upstream 2.0kb upstream 4296 true Chr4: 9769297-9773592 Arabidopsis thaliana
AT4G17520 2.0kb upstream 2.0kb upstream 2000 false Chr4: 9769297-9771296 Arabidopsis thaliana
AT4G17520 2.0kb downstream 2.0kb downstream 4296 true Chr4: 9771297-9775592 Arabidopsis thaliana
AT4G17520 2.0kb downstream 2.0kb downstream 2000 false Chr4: 9773593-9775592 Arabidopsis thaliana
AT4G17520 5.0kb upstream 5.0kb upstream 7296 true Chr4: 9766297-9773592 Arabidopsis thaliana
AT4G17520 5.0kb upstream 5.0kb upstream 5000 false Chr4: 9766297-9771296 Arabidopsis thaliana
AT4G17520 5.0kb downstream 5.0kb downstream 7296 true Chr4: 9771297-9778592 Arabidopsis thaliana
AT4G17520 5.0kb downstream 5.0kb downstream 5000 false Chr4: 9773593-9778592 Arabidopsis thaliana
AT4G17520 10.0kb upstream 10.0kb upstream 12296 true Chr4: 9761297-9773592 Arabidopsis thaliana
AT4G17520 10.0kb upstream 10.0kb upstream 10000 false Chr4: 9761297-9771296 Arabidopsis thaliana
AT4G17520 10.0kb downstream 10.0kb downstream 12296 true Chr4: 9771297-9783592 Arabidopsis thaliana
AT4G17520 10.0kb downstream 10.0kb downstream 10000 false Chr4: 9773593-9783592 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362153 5261 Brassicaceae View MSA
123838812 5264 Brassicales-Malvales View MSA
124346600 5266 SBM View MSA
124248312 5268 Malvidae View MSA
124069923 5270 Rosid View MSA
123753548 5271 Pentapetalae View MSA
122791603 5272 Eudicot View MSA
122042476 5273 Angiosperm View MSA
121348767 5274 Embryophyte View MSA
123425134 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 86.203     High  
cufflinks 83.336     High  
cufflinks 85.304     High  
cufflinks 90.158     High  
cufflinks 69.673     High Low
cufflinks 108.157     High High

0 Strain