Gene : AT4G17350 A. thaliana TAIR10
Defline:  (1 of 8) PF05703//PF08458 - Auxin canalisation (Auxin_canalis) // Plant pleckstrin homology-like region (PH_2) Genomic Order:  1656
Name:  ? AT4G17350 Secondary Identifier:  ? PAC:19644836
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G17350 0.5kb upstream 0.5kb upstream 2943 true Chr4: 9700632-9703574 Arabidopsis thaliana
AT4G17350 0.5kb upstream 0.5kb upstream 500 false Chr4: 9700632-9701131 Arabidopsis thaliana
AT4G17350 0.5kb downstream 0.5kb downstream 2943 true Chr4: 9701132-9704074 Arabidopsis thaliana
AT4G17350 0.5kb downstream 0.5kb downstream 500 false Chr4: 9703575-9704074 Arabidopsis thaliana
AT4G17350 1.0kb upstream 1.0kb upstream 3443 true Chr4: 9700132-9703574 Arabidopsis thaliana
AT4G17350 1.0kb upstream 1.0kb upstream 1000 false Chr4: 9700132-9701131 Arabidopsis thaliana
AT4G17350 1.0kb downstream 1.0kb downstream 3443 true Chr4: 9701132-9704574 Arabidopsis thaliana
AT4G17350 1.0kb downstream 1.0kb downstream 1000 false Chr4: 9703575-9704574 Arabidopsis thaliana
AT4G17350 2.0kb upstream 2.0kb upstream 4443 true Chr4: 9699132-9703574 Arabidopsis thaliana
AT4G17350 2.0kb upstream 2.0kb upstream 2000 false Chr4: 9699132-9701131 Arabidopsis thaliana
AT4G17350 2.0kb downstream 2.0kb downstream 4443 true Chr4: 9701132-9705574 Arabidopsis thaliana
AT4G17350 2.0kb downstream 2.0kb downstream 2000 false Chr4: 9703575-9705574 Arabidopsis thaliana
AT4G17350 5.0kb upstream 5.0kb upstream 7443 true Chr4: 9696132-9703574 Arabidopsis thaliana
AT4G17350 5.0kb upstream 5.0kb upstream 5000 false Chr4: 9696132-9701131 Arabidopsis thaliana
AT4G17350 5.0kb downstream 5.0kb downstream 7443 true Chr4: 9701132-9708574 Arabidopsis thaliana
AT4G17350 5.0kb downstream 5.0kb downstream 5000 false Chr4: 9703575-9708574 Arabidopsis thaliana
AT4G17350 10.0kb upstream 10.0kb upstream 12443 true Chr4: 9691132-9703574 Arabidopsis thaliana
AT4G17350 10.0kb upstream 10.0kb upstream 10000 false Chr4: 9691132-9701131 Arabidopsis thaliana
AT4G17350 10.0kb downstream 10.0kb downstream 12443 true Chr4: 9701132-9713574 Arabidopsis thaliana
AT4G17350 10.0kb downstream 10.0kb downstream 10000 false Chr4: 9703575-9713574 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363437 5261 Brassicaceae View MSA
123832758 5264 Brassicales-Malvales View MSA
124340402 5266 SBM View MSA
124250887 5268 Malvidae View MSA
124050253 5270 Rosid View MSA
123741992 5271 Pentapetalae View MSA
122794510 5272 Eudicot View MSA
122048590 5273 Angiosperm View MSA
121311030 5274 Embryophyte View MSA
123348384 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.128        
cufflinks 3.997        
cufflinks 2.6        
cufflinks 3.889        
cufflinks 2.098       Low
cufflinks 2.593        

0 Strain