Gene : AAH A. thaliana TAIR10
Primary Identifier:  ? AT4G20070 Defline:  (1 of 1) 3.5.3.9 - Allantoate deiminase
Genomic Order:  1962 Name:  ? AT4G20070
Secondary Identifier:  ? PAC:19645596
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5692 Arabidopsis thaliana pathologic  
Athaliana PWY-5698 Arabidopsis thaliana pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G20070 0.5kb upstream 0.5kb upstream 3742 true Chr4: 10860955-10864696 Arabidopsis thaliana
AT4G20070 0.5kb upstream 0.5kb upstream 500 false Chr4: 10860955-10861454 Arabidopsis thaliana
AT4G20070 0.5kb downstream 0.5kb downstream 3742 true Chr4: 10861455-10865196 Arabidopsis thaliana
AT4G20070 0.5kb downstream 0.5kb downstream 500 false Chr4: 10864697-10865196 Arabidopsis thaliana
AT4G20070 1.0kb upstream 1.0kb upstream 4242 true Chr4: 10860455-10864696 Arabidopsis thaliana
AT4G20070 1.0kb upstream 1.0kb upstream 1000 false Chr4: 10860455-10861454 Arabidopsis thaliana
AT4G20070 1.0kb downstream 1.0kb downstream 4242 true Chr4: 10861455-10865696 Arabidopsis thaliana
AT4G20070 1.0kb downstream 1.0kb downstream 1000 false Chr4: 10864697-10865696 Arabidopsis thaliana
AT4G20070 2.0kb upstream 2.0kb upstream 5242 true Chr4: 10859455-10864696 Arabidopsis thaliana
AT4G20070 2.0kb upstream 2.0kb upstream 2000 false Chr4: 10859455-10861454 Arabidopsis thaliana
AT4G20070 2.0kb downstream 2.0kb downstream 5242 true Chr4: 10861455-10866696 Arabidopsis thaliana
AT4G20070 2.0kb downstream 2.0kb downstream 2000 false Chr4: 10864697-10866696 Arabidopsis thaliana
AT4G20070 5.0kb upstream 5.0kb upstream 8242 true Chr4: 10856455-10864696 Arabidopsis thaliana
AT4G20070 5.0kb upstream 5.0kb upstream 5000 false Chr4: 10856455-10861454 Arabidopsis thaliana
AT4G20070 5.0kb downstream 5.0kb downstream 8242 true Chr4: 10861455-10869696 Arabidopsis thaliana
AT4G20070 5.0kb downstream 5.0kb downstream 5000 false Chr4: 10864697-10869696 Arabidopsis thaliana
AT4G20070 10.0kb upstream 10.0kb upstream 13242 true Chr4: 10851455-10864696 Arabidopsis thaliana
AT4G20070 10.0kb upstream 10.0kb upstream 10000 false Chr4: 10851455-10861454 Arabidopsis thaliana
AT4G20070 10.0kb downstream 10.0kb downstream 13242 true Chr4: 10861455-10874696 Arabidopsis thaliana
AT4G20070 10.0kb downstream 10.0kb downstream 10000 false Chr4: 10864697-10874696 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369287 5261 Brassicaceae View MSA
123827726 5264 Brassicales-Malvales View MSA
124342147 5266 SBM View MSA
124242730 5268 Malvidae View MSA
124067996 5270 Rosid View MSA
123737460 5271 Pentapetalae View MSA
122786407 5272 Eudicot View MSA
122042851 5273 Angiosperm View MSA
121347111 5274 Embryophyte View MSA
123424099 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.344       Low
cufflinks 11.649        
cufflinks 20.516        
cufflinks 23.598        
cufflinks 29.175     High  
cufflinks 3.212       Low

0 Strain