Gene : AT4G19810 A. thaliana TAIR10
Defline:  (1 of 7) PTHR11177:SF219 - CHITINASE-LIKE PROTEIN-RELATED Genomic Order:  1930
Name:  ? AT4G19810 Secondary Identifier:  ? PAC:19644419
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-6902 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G19810 0.5kb upstream 0.5kb upstream 2320 true Chr4: 10763934-10766253 Arabidopsis thaliana
AT4G19810 0.5kb upstream 0.5kb upstream 500 false Chr4: 10765754-10766253 Arabidopsis thaliana
AT4G19810 0.5kb downstream 0.5kb downstream 2320 true Chr4: 10763434-10765753 Arabidopsis thaliana
AT4G19810 0.5kb downstream 0.5kb downstream 500 false Chr4: 10763434-10763933 Arabidopsis thaliana
AT4G19810 1.0kb upstream 1.0kb upstream 2820 true Chr4: 10763934-10766753 Arabidopsis thaliana
AT4G19810 1.0kb upstream 1.0kb upstream 1000 false Chr4: 10765754-10766753 Arabidopsis thaliana
AT4G19810 1.0kb downstream 1.0kb downstream 2820 true Chr4: 10762934-10765753 Arabidopsis thaliana
AT4G19810 1.0kb downstream 1.0kb downstream 1000 false Chr4: 10762934-10763933 Arabidopsis thaliana
AT4G19810 2.0kb upstream 2.0kb upstream 3820 true Chr4: 10763934-10767753 Arabidopsis thaliana
AT4G19810 2.0kb upstream 2.0kb upstream 2000 false Chr4: 10765754-10767753 Arabidopsis thaliana
AT4G19810 2.0kb downstream 2.0kb downstream 3820 true Chr4: 10761934-10765753 Arabidopsis thaliana
AT4G19810 2.0kb downstream 2.0kb downstream 2000 false Chr4: 10761934-10763933 Arabidopsis thaliana
AT4G19810 5.0kb upstream 5.0kb upstream 6820 true Chr4: 10763934-10770753 Arabidopsis thaliana
AT4G19810 5.0kb upstream 5.0kb upstream 5000 false Chr4: 10765754-10770753 Arabidopsis thaliana
AT4G19810 5.0kb downstream 5.0kb downstream 6820 true Chr4: 10758934-10765753 Arabidopsis thaliana
AT4G19810 5.0kb downstream 5.0kb downstream 5000 false Chr4: 10758934-10763933 Arabidopsis thaliana
AT4G19810 10.0kb upstream 10.0kb upstream 11820 true Chr4: 10763934-10775753 Arabidopsis thaliana
AT4G19810 10.0kb upstream 10.0kb upstream 10000 false Chr4: 10765754-10775753 Arabidopsis thaliana
AT4G19810 10.0kb downstream 10.0kb downstream 11820 true Chr4: 10753934-10765753 Arabidopsis thaliana
AT4G19810 10.0kb downstream 10.0kb downstream 10000 false Chr4: 10753934-10763933 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362004 5261 Brassicaceae View MSA
123831557 5264 Brassicales-Malvales View MSA
124339327 5266 SBM View MSA
124253771 5268 Malvidae View MSA
124068556 5270 Rosid View MSA
123750744 5271 Pentapetalae View MSA
122797322 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.621        
cufflinks 9.168        
cufflinks 2.71       Low
cufflinks 16.118       High
cufflinks 4.31        
cufflinks 16.988       High

0 Strain