Gene : AT4G19880 A. thaliana TAIR10
Defline:  (1 of 3) K07393 - putative glutathione S-transferase (ECM4) Genomic Order:  1939
Name:  ? AT4G19880 Secondary Identifier:  ? PAC:19648046
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G19880 0.5kb upstream 0.5kb upstream 2666 true Chr4: 10784391-10787056 Arabidopsis thaliana
AT4G19880 0.5kb upstream 0.5kb upstream 500 false Chr4: 10786557-10787056 Arabidopsis thaliana
AT4G19880 0.5kb downstream 0.5kb downstream 2666 true Chr4: 10783891-10786556 Arabidopsis thaliana
AT4G19880 0.5kb downstream 0.5kb downstream 500 false Chr4: 10783891-10784390 Arabidopsis thaliana
AT4G19880 1.0kb upstream 1.0kb upstream 3166 true Chr4: 10784391-10787556 Arabidopsis thaliana
AT4G19880 1.0kb upstream 1.0kb upstream 1000 false Chr4: 10786557-10787556 Arabidopsis thaliana
AT4G19880 1.0kb downstream 1.0kb downstream 3166 true Chr4: 10783391-10786556 Arabidopsis thaliana
AT4G19880 1.0kb downstream 1.0kb downstream 1000 false Chr4: 10783391-10784390 Arabidopsis thaliana
AT4G19880 2.0kb upstream 2.0kb upstream 4166 true Chr4: 10784391-10788556 Arabidopsis thaliana
AT4G19880 2.0kb upstream 2.0kb upstream 2000 false Chr4: 10786557-10788556 Arabidopsis thaliana
AT4G19880 2.0kb downstream 2.0kb downstream 4166 true Chr4: 10782391-10786556 Arabidopsis thaliana
AT4G19880 2.0kb downstream 2.0kb downstream 2000 false Chr4: 10782391-10784390 Arabidopsis thaliana
AT4G19880 5.0kb upstream 5.0kb upstream 7166 true Chr4: 10784391-10791556 Arabidopsis thaliana
AT4G19880 5.0kb upstream 5.0kb upstream 5000 false Chr4: 10786557-10791556 Arabidopsis thaliana
AT4G19880 5.0kb downstream 5.0kb downstream 7166 true Chr4: 10779391-10786556 Arabidopsis thaliana
AT4G19880 5.0kb downstream 5.0kb downstream 5000 false Chr4: 10779391-10784390 Arabidopsis thaliana
AT4G19880 10.0kb upstream 10.0kb upstream 12166 true Chr4: 10784391-10796556 Arabidopsis thaliana
AT4G19880 10.0kb upstream 10.0kb upstream 10000 false Chr4: 10786557-10796556 Arabidopsis thaliana
AT4G19880 10.0kb downstream 10.0kb downstream 12166 true Chr4: 10774391-10786556 Arabidopsis thaliana
AT4G19880 10.0kb downstream 10.0kb downstream 10000 false Chr4: 10774391-10784390 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365295 5261 Brassicaceae View MSA
123835865 5264 Brassicales-Malvales View MSA
124346985 5266 SBM View MSA
124241857 5268 Malvidae View MSA
124069064 5270 Rosid View MSA
123747501 5271 Pentapetalae View MSA
122793506 5272 Eudicot View MSA
122044364 5273 Angiosperm View MSA
121346730 5274 Embryophyte View MSA
123424261 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.169        
cufflinks 19.758       High
cufflinks 9.141       Low
cufflinks 21.293       High
cufflinks 12.28        
cufflinks 14.572        

0 Strain