Gene : CYCT1;2 A. thaliana TAIR10
Primary Identifier:  ? AT4G19560 Defline:  (1 of 5) K15188 - cyclin T (CCNT)
Genomic Order:  1906 Name:  ? AT4G19560
Secondary Identifier:  ? PAC:19648868
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G19560 0.5kb upstream 0.5kb upstream 3789 true Chr4: 10660928-10664716 Arabidopsis thaliana
AT4G19560 0.5kb upstream 0.5kb upstream 500 false Chr4: 10660928-10661427 Arabidopsis thaliana
AT4G19560 0.5kb downstream 0.5kb downstream 3789 true Chr4: 10661428-10665216 Arabidopsis thaliana
AT4G19560 0.5kb downstream 0.5kb downstream 500 false Chr4: 10664717-10665216 Arabidopsis thaliana
AT4G19560 1.0kb upstream 1.0kb upstream 4289 true Chr4: 10660428-10664716 Arabidopsis thaliana
AT4G19560 1.0kb upstream 1.0kb upstream 1000 false Chr4: 10660428-10661427 Arabidopsis thaliana
AT4G19560 1.0kb downstream 1.0kb downstream 4289 true Chr4: 10661428-10665716 Arabidopsis thaliana
AT4G19560 1.0kb downstream 1.0kb downstream 1000 false Chr4: 10664717-10665716 Arabidopsis thaliana
AT4G19560 2.0kb upstream 2.0kb upstream 5289 true Chr4: 10659428-10664716 Arabidopsis thaliana
AT4G19560 2.0kb upstream 2.0kb upstream 2000 false Chr4: 10659428-10661427 Arabidopsis thaliana
AT4G19560 2.0kb downstream 2.0kb downstream 5289 true Chr4: 10661428-10666716 Arabidopsis thaliana
AT4G19560 2.0kb downstream 2.0kb downstream 2000 false Chr4: 10664717-10666716 Arabidopsis thaliana
AT4G19560 5.0kb upstream 5.0kb upstream 8289 true Chr4: 10656428-10664716 Arabidopsis thaliana
AT4G19560 5.0kb upstream 5.0kb upstream 5000 false Chr4: 10656428-10661427 Arabidopsis thaliana
AT4G19560 5.0kb downstream 5.0kb downstream 8289 true Chr4: 10661428-10669716 Arabidopsis thaliana
AT4G19560 5.0kb downstream 5.0kb downstream 5000 false Chr4: 10664717-10669716 Arabidopsis thaliana
AT4G19560 10.0kb upstream 10.0kb upstream 13289 true Chr4: 10651428-10664716 Arabidopsis thaliana
AT4G19560 10.0kb upstream 10.0kb upstream 10000 false Chr4: 10651428-10661427 Arabidopsis thaliana
AT4G19560 10.0kb downstream 10.0kb downstream 13289 true Chr4: 10661428-10674716 Arabidopsis thaliana
AT4G19560 10.0kb downstream 10.0kb downstream 10000 false Chr4: 10664717-10674716 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121511756 5273 Angiosperm View MSA
122378584 5261 Brassicaceae View MSA
123801921 5264 Brassicales-Malvales View MSA
124299169 5266 SBM View MSA
124150657 5268 Malvidae View MSA
123876236 5270 Rosid View MSA
123459936 5271 Pentapetalae View MSA
122495318 5272 Eudicot View MSA
123429117 5275 Viridiplantae View MSA
120784787 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.53        
cufflinks 0.378       Low
cufflinks 0.561        
cufflinks 0.542        
cufflinks 0.557        
cufflinks 0.357       Low

0 Strain