Gene : AT4G19390 A. thaliana TAIR10
Defline:  (1 of 2) PF03350 - Uncharacterized protein family, UPF0114 (UPF0114) Genomic Order:  1889
Name:  ? AT4G19390 Secondary Identifier:  ? PAC:19646045
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G19390 0.5kb upstream 0.5kb upstream 2161 true Chr4: 10574768-10576928 Arabidopsis thaliana
AT4G19390 0.5kb upstream 0.5kb upstream 500 false Chr4: 10576429-10576928 Arabidopsis thaliana
AT4G19390 0.5kb downstream 0.5kb downstream 2161 true Chr4: 10574268-10576428 Arabidopsis thaliana
AT4G19390 0.5kb downstream 0.5kb downstream 500 false Chr4: 10574268-10574767 Arabidopsis thaliana
AT4G19390 1.0kb upstream 1.0kb upstream 2661 true Chr4: 10574768-10577428 Arabidopsis thaliana
AT4G19390 1.0kb upstream 1.0kb upstream 1000 false Chr4: 10576429-10577428 Arabidopsis thaliana
AT4G19390 1.0kb downstream 1.0kb downstream 2661 true Chr4: 10573768-10576428 Arabidopsis thaliana
AT4G19390 1.0kb downstream 1.0kb downstream 1000 false Chr4: 10573768-10574767 Arabidopsis thaliana
AT4G19390 2.0kb upstream 2.0kb upstream 3661 true Chr4: 10574768-10578428 Arabidopsis thaliana
AT4G19390 2.0kb upstream 2.0kb upstream 2000 false Chr4: 10576429-10578428 Arabidopsis thaliana
AT4G19390 2.0kb downstream 2.0kb downstream 3661 true Chr4: 10572768-10576428 Arabidopsis thaliana
AT4G19390 2.0kb downstream 2.0kb downstream 2000 false Chr4: 10572768-10574767 Arabidopsis thaliana
AT4G19390 5.0kb upstream 5.0kb upstream 6661 true Chr4: 10574768-10581428 Arabidopsis thaliana
AT4G19390 5.0kb upstream 5.0kb upstream 5000 false Chr4: 10576429-10581428 Arabidopsis thaliana
AT4G19390 5.0kb downstream 5.0kb downstream 6661 true Chr4: 10569768-10576428 Arabidopsis thaliana
AT4G19390 5.0kb downstream 5.0kb downstream 5000 false Chr4: 10569768-10574767 Arabidopsis thaliana
AT4G19390 10.0kb upstream 10.0kb upstream 11661 true Chr4: 10574768-10586428 Arabidopsis thaliana
AT4G19390 10.0kb upstream 10.0kb upstream 10000 false Chr4: 10576429-10586428 Arabidopsis thaliana
AT4G19390 10.0kb downstream 10.0kb downstream 11661 true Chr4: 10564768-10576428 Arabidopsis thaliana
AT4G19390 10.0kb downstream 10.0kb downstream 10000 false Chr4: 10564768-10574767 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370092 5261 Brassicaceae View MSA
123834008 5264 Brassicales-Malvales View MSA
124338632 5266 SBM View MSA
124241404 5268 Malvidae View MSA
124061813 5270 Rosid View MSA
123738693 5271 Pentapetalae View MSA
122789368 5272 Eudicot View MSA
122048009 5273 Angiosperm View MSA
121348495 5274 Embryophyte View MSA
123426050 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.199        
cufflinks 7.239        
cufflinks 18.436        
cufflinks 6.765        
cufflinks 22.929       High
cufflinks 5.843       Low

0 Strain