Gene : LCR15 A. thaliana TAIR10
Primary Identifier:  ? AT4G19038 Defline:  (1 of 42) PF07333 - S locus-related glycoprotein 1 binding pollen coat protein (SLR1-BP) (SLR1-BP)
Genomic Order:  1853 Name:  ? AT4G19038
Secondary Identifier:  ? PAC:19648114
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0 Pathways

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G19038 0.5kb upstream 0.5kb upstream 1490 true Chr4: 10430009-10431498 Arabidopsis thaliana
AT4G19038 0.5kb upstream 0.5kb upstream 500 false Chr4: 10430999-10431498 Arabidopsis thaliana
AT4G19038 0.5kb downstream 0.5kb downstream 1490 true Chr4: 10429509-10430998 Arabidopsis thaliana
AT4G19038 0.5kb downstream 0.5kb downstream 500 false Chr4: 10429509-10430008 Arabidopsis thaliana
AT4G19038 1.0kb upstream 1.0kb upstream 1990 true Chr4: 10430009-10431998 Arabidopsis thaliana
AT4G19038 1.0kb upstream 1.0kb upstream 1000 false Chr4: 10430999-10431998 Arabidopsis thaliana
AT4G19038 1.0kb downstream 1.0kb downstream 1990 true Chr4: 10429009-10430998 Arabidopsis thaliana
AT4G19038 1.0kb downstream 1.0kb downstream 1000 false Chr4: 10429009-10430008 Arabidopsis thaliana
AT4G19038 2.0kb upstream 2.0kb upstream 2990 true Chr4: 10430009-10432998 Arabidopsis thaliana
AT4G19038 2.0kb upstream 2.0kb upstream 2000 false Chr4: 10430999-10432998 Arabidopsis thaliana
AT4G19038 2.0kb downstream 2.0kb downstream 2990 true Chr4: 10428009-10430998 Arabidopsis thaliana
AT4G19038 2.0kb downstream 2.0kb downstream 2000 false Chr4: 10428009-10430008 Arabidopsis thaliana
AT4G19038 5.0kb upstream 5.0kb upstream 5990 true Chr4: 10430009-10435998 Arabidopsis thaliana
AT4G19038 5.0kb upstream 5.0kb upstream 5000 false Chr4: 10430999-10435998 Arabidopsis thaliana
AT4G19038 5.0kb downstream 5.0kb downstream 5990 true Chr4: 10425009-10430998 Arabidopsis thaliana
AT4G19038 5.0kb downstream 5.0kb downstream 5000 false Chr4: 10425009-10430008 Arabidopsis thaliana
AT4G19038 10.0kb upstream 10.0kb upstream 10990 true Chr4: 10430009-10440998 Arabidopsis thaliana
AT4G19038 10.0kb upstream 10.0kb upstream 10000 false Chr4: 10430999-10440998 Arabidopsis thaliana
AT4G19038 10.0kb downstream 10.0kb downstream 10990 true Chr4: 10420009-10430998 Arabidopsis thaliana
AT4G19038 10.0kb downstream 10.0kb downstream 10000 false Chr4: 10420009-10430008 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121494912 5273 Angiosperm Singleton cluster - no MSA
122330754 5261 Brassicaceae Singleton cluster - no MSA
123771979 5264 Brassicales-Malvales Singleton cluster - no MSA
124270500 5266 SBM Singleton cluster - no MSA
124126567 5268 Malvidae Singleton cluster - no MSA
123855471 5270 Rosid Singleton cluster - no MSA
123441448 5271 Pentapetalae Singleton cluster - no MSA
122477033 5272 Eudicot Singleton cluster - no MSA
120768279 5274 Embryophyte Singleton cluster - no MSA
122810668 5275 Viridiplantae Singleton cluster - no MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain