Gene : AT4G19080 A. thaliana TAIR10
Defline:  (1 of 6) PF04578 - Protein of unknown function, DUF594 (DUF594) Genomic Order:  1859
Name:  ? AT4G19080 Secondary Identifier:  ? PAC:19648986
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G19080 0.5kb upstream 0.5kb upstream 1484 true Chr4: 10448813-10450296 Arabidopsis thaliana
AT4G19080 0.5kb upstream 0.5kb upstream 500 false Chr4: 10449797-10450296 Arabidopsis thaliana
AT4G19080 0.5kb downstream 0.5kb downstream 1484 true Chr4: 10448313-10449796 Arabidopsis thaliana
AT4G19080 0.5kb downstream 0.5kb downstream 500 false Chr4: 10448313-10448812 Arabidopsis thaliana
AT4G19080 1.0kb upstream 1.0kb upstream 1984 true Chr4: 10448813-10450796 Arabidopsis thaliana
AT4G19080 1.0kb upstream 1.0kb upstream 1000 false Chr4: 10449797-10450796 Arabidopsis thaliana
AT4G19080 1.0kb downstream 1.0kb downstream 1984 true Chr4: 10447813-10449796 Arabidopsis thaliana
AT4G19080 1.0kb downstream 1.0kb downstream 1000 false Chr4: 10447813-10448812 Arabidopsis thaliana
AT4G19080 2.0kb upstream 2.0kb upstream 2984 true Chr4: 10448813-10451796 Arabidopsis thaliana
AT4G19080 2.0kb upstream 2.0kb upstream 2000 false Chr4: 10449797-10451796 Arabidopsis thaliana
AT4G19080 2.0kb downstream 2.0kb downstream 2984 true Chr4: 10446813-10449796 Arabidopsis thaliana
AT4G19080 2.0kb downstream 2.0kb downstream 2000 false Chr4: 10446813-10448812 Arabidopsis thaliana
AT4G19080 5.0kb upstream 5.0kb upstream 5984 true Chr4: 10448813-10454796 Arabidopsis thaliana
AT4G19080 5.0kb upstream 5.0kb upstream 5000 false Chr4: 10449797-10454796 Arabidopsis thaliana
AT4G19080 5.0kb downstream 5.0kb downstream 5984 true Chr4: 10443813-10449796 Arabidopsis thaliana
AT4G19080 5.0kb downstream 5.0kb downstream 5000 false Chr4: 10443813-10448812 Arabidopsis thaliana
AT4G19080 10.0kb upstream 10.0kb upstream 10984 true Chr4: 10448813-10459796 Arabidopsis thaliana
AT4G19080 10.0kb upstream 10.0kb upstream 10000 false Chr4: 10449797-10459796 Arabidopsis thaliana
AT4G19080 10.0kb downstream 10.0kb downstream 10984 true Chr4: 10438813-10449796 Arabidopsis thaliana
AT4G19080 10.0kb downstream 10.0kb downstream 10000 false Chr4: 10438813-10448812 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029142 5273 Angiosperm View MSA
122330845 5261 Brassicaceae Singleton cluster - no MSA
123772065 5264 Brassicales-Malvales Singleton cluster - no MSA
124270586 5266 SBM Singleton cluster - no MSA
124247770 5268 Malvidae View MSA
124073520 5270 Rosid View MSA
123745115 5271 Pentapetalae View MSA
122771372 5272 Eudicot View MSA
121350539 5274 Embryophyte View MSA
123381781 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.444        
cufflinks 0.477        
cufflinks 0.237     Low Low
cufflinks 0.729       High
cufflinks 0.254       Low
cufflinks 0.439        

0 Strain