Gene : AT4G18930 A. thaliana TAIR10
Defline:  (1 of 2) PTHR28141//PTHR28141:SF1 - FAMILY NOT NAMED // 2',3'-CYCLIC-NUCLEOTIDE 3'-PHOSPHODIESTERASE Genomic Order:  1838
Name:  ? AT4G18930 Secondary Identifier:  ? PAC:19646729
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G18930 0.5kb upstream 0.5kb upstream 1842 true Chr4: 10370204-10372045 Arabidopsis thaliana
AT4G18930 0.5kb upstream 0.5kb upstream 500 false Chr4: 10370204-10370703 Arabidopsis thaliana
AT4G18930 0.5kb downstream 0.5kb downstream 1842 true Chr4: 10370704-10372545 Arabidopsis thaliana
AT4G18930 0.5kb downstream 0.5kb downstream 500 false Chr4: 10372046-10372545 Arabidopsis thaliana
AT4G18930 1.0kb upstream 1.0kb upstream 2342 true Chr4: 10369704-10372045 Arabidopsis thaliana
AT4G18930 1.0kb upstream 1.0kb upstream 1000 false Chr4: 10369704-10370703 Arabidopsis thaliana
AT4G18930 1.0kb downstream 1.0kb downstream 2342 true Chr4: 10370704-10373045 Arabidopsis thaliana
AT4G18930 1.0kb downstream 1.0kb downstream 1000 false Chr4: 10372046-10373045 Arabidopsis thaliana
AT4G18930 2.0kb upstream 2.0kb upstream 3342 true Chr4: 10368704-10372045 Arabidopsis thaliana
AT4G18930 2.0kb upstream 2.0kb upstream 2000 false Chr4: 10368704-10370703 Arabidopsis thaliana
AT4G18930 2.0kb downstream 2.0kb downstream 3342 true Chr4: 10370704-10374045 Arabidopsis thaliana
AT4G18930 2.0kb downstream 2.0kb downstream 2000 false Chr4: 10372046-10374045 Arabidopsis thaliana
AT4G18930 5.0kb upstream 5.0kb upstream 6342 true Chr4: 10365704-10372045 Arabidopsis thaliana
AT4G18930 5.0kb upstream 5.0kb upstream 5000 false Chr4: 10365704-10370703 Arabidopsis thaliana
AT4G18930 5.0kb downstream 5.0kb downstream 6342 true Chr4: 10370704-10377045 Arabidopsis thaliana
AT4G18930 5.0kb downstream 5.0kb downstream 5000 false Chr4: 10372046-10377045 Arabidopsis thaliana
AT4G18930 10.0kb upstream 10.0kb upstream 11342 true Chr4: 10360704-10372045 Arabidopsis thaliana
AT4G18930 10.0kb upstream 10.0kb upstream 10000 false Chr4: 10360704-10370703 Arabidopsis thaliana
AT4G18930 10.0kb downstream 10.0kb downstream 11342 true Chr4: 10370704-10382045 Arabidopsis thaliana
AT4G18930 10.0kb downstream 10.0kb downstream 10000 false Chr4: 10372046-10382045 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374625 5261 Brassicaceae View MSA
123836138 5264 Brassicales-Malvales View MSA
124339777 5266 SBM View MSA
124240345 5268 Malvidae View MSA
124065513 5270 Rosid View MSA
123741302 5271 Pentapetalae View MSA
122793487 5272 Eudicot View MSA
122041561 5273 Angiosperm View MSA
123429145 5275 Viridiplantae View MSA
121349919 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 33.869     High  
cufflinks 39.301     High  
cufflinks 31.153     High Low
cufflinks 38.691     High  
cufflinks 44.919     High High
cufflinks 34.749     High  

0 Strain